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scnpilot_p_inoc_scaffold_48

Search features with annotation key words

Displaying items 451-480 of 546 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_48_451
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

561542..562150
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0003826491
TetR family transcriptional regulator {ECO:0000313|EMBL:AKC85407.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source
regulatory protein TetR
scnpilot_p_inoc_scaffold_48_452
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

562147..563322
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI0003798935 rbh
Membrane fusion protein {ECO:0000313|EMBL:ELQ11364.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas trans
RND family efflux transporter, MFP subunit
scnpilot_p_inoc_scaffold_48_453
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

563335..566493
DNA (3159bp) protein (1053aa)
multidrug transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000361FC8A
Multidrug transporter {ECO:0000313|EMBL:AHY58547.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomona
multidrug transporter
scnpilot_p_inoc_scaffold_48_454
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(566730..567917)
DNA (1188bp) protein (396aa)
Putative membrane protein putative LtrA domain (Low temperature requirement A protein ) n=1 Tax=Ralstonia solanacearum CFBP2957 RepID=D8NQV5_RALSL rbh
Membrane protein {ECO:0000313|EMBL:KGM33264.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06
putative membrane protein; putative LtrA domain (Low temperature requirement A protein )
scnpilot_p_inoc_scaffold_48_455
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(568124..569428)
DNA (1305bp) protein (435aa)
WD40 domain protein beta Propeller n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UPA0_ROSS1
WD40 domain-containing protein
WD40 domain protein beta Propeller {ECO:0000313|EMBL:ABQ88453.1}; Flags: Precursor;; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseifle
scnpilot_p_inoc_scaffold_48_456
Bacillus licheniformis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(569545..571002)
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Bacillus licheniformis 9945A RepID=R9TQT8_BACLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN35298.1}; TaxID=766760 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus licheniformis 9945A.;"
scnpilot_p_inoc_scaffold_48_457
unknown

Not on your lists

comp(571006..571773)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000369E480
scnpilot_p_inoc_scaffold_48_458
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

572340..575663
DNA (3324bp) protein (1108aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08VY3_STIAD rbh
Uncharacterized protein {ECO:0000313|EMBL:KFE64941.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
hypothetical protein
scnpilot_p_inoc_scaffold_48_459
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

575971..576669
DNA (699bp) protein (233aa)
Putative esterase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJE1_9GAMM
putative esterase
Putative esterase {ECO:0000313|EMBL:AGG90222.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rho
scnpilot_p_inoc_scaffold_48_460
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(576679..577302)
DNA (624bp) protein (208aa)
membrane protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B6EB5B
Uncharacterized protein {ECO:0000313|EMBL:KFN50705.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas compost
hypothetical protein
scnpilot_p_inoc_scaffold_48_461

Not on your lists

comp(577673..578833)
DNA (1161bp) protein (387aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1)
acyl-CoA dehydrogenase n=1 Tax=Rudaea cellulosilytica RepID=UPI00036486A8 rbh
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:EQD69491.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
scnpilot_p_inoc_scaffold_48_462
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(578983..580398)
DNA (1416bp) protein (472aa)
Serine proteinase n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CY20_9BURK
Serine proteinase {ECO:0000313|EMBL:EIJ48513.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. GW
serine proteinase
scnpilot_p_inoc_scaffold_48_463

Not on your lists

comp(580489..581280)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036EE8BA rbh
Phospholipase/Carboxylesterase {ECO:0000313|EMBL:EQD69490.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
phospholipase/carboxylesterase
scnpilot_p_inoc_scaffold_48_464
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

581395..582321
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000363A0BA rbh
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:EIL92881.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodan
ArsR family transcriptional regulator
scnpilot_p_inoc_scaffold_48_465
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

582371..583462
DNA (1092bp) protein (364aa)
5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Xanthomonas sacchari RepID=UPI000262AD70
5-methyltetrahydrofolate--homocysteine methyltransferase
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:AJC47475.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomon
scnpilot_p_inoc_scaffold_48_466
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

583957..586656
DNA (2700bp) protein (900aa)
5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Rudaea cellulosilytica RepID=UPI00037B50C3 rbh
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:AHX12652.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.
5-methyltetrahydrofolate--homocysteine methyltransferase
scnpilot_p_inoc_scaffold_48_467
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

587214..592352
DNA (5139bp) protein (1713aa)
wall-associated protein, partial n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00035C9F02 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN40991.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
rhsA; Rhs family protein
scnpilot_p_inoc_scaffold_48_468

Not on your lists

comp(592549..592869)
DNA (321bp) protein (107aa)
Putative conserved protein, lipid A biosynthesis n=2 Tax=mine drainage metagenome RepID=T1CC00_9ZZZZ
Putative conserved protein, lipid A biosynthesis {ECO:0000313|EMBL:EQD79812.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
lipid A biosynthesis acyltransferase
scnpilot_p_inoc_scaffold_48_469
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(593077..593862)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AEJ1_AZOBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC96350.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum b
scnpilot_p_inoc_scaffold_48_470
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

594216..594962
DNA (747bp) protein (249aa)
Conserved hypothetical signal peptide protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024E1_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX16285.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
scnpilot_p_inoc_scaffold_48_471
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

594976..598209
DNA (3234bp) protein (1078aa)
UPI0003D01C25 related cluster n=1 Tax=unknown RepID=UPI0003D01C25 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHX13451.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
hypothetical protein
scnpilot_p_inoc_scaffold_48_472
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(598402..600480)
DNA (2079bp) protein (693aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI000360D9CB
UvrD/REP helicase Tax=CG_Proteo_01
UvrD/REP helicase
scnpilot_p_inoc_scaffold_48_473
Acinetobacter bohemicus, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(600555..601250)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. ANC 3994 RepID=N8P2U4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENU20720.1}; TaxID=1217715 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter bohe
scnpilot_p_inoc_scaffold_48_474
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(601286..604120)
DNA (2835bp) protein (945aa)
DNA methylase N-4/N-6 domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2I4_9GAMM rbh
DNA methylase N-4/N-6 domain-containing protein {ECO:0000313|EMBL:EIL93675.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;"
DNA methylase N-4/N-6 domain-containing protein
scnpilot_p_inoc_scaffold_48_475
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(604134..604976)
DNA (843bp) protein (281aa)
DNA-damage-inducible protein D n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JN82_9GAMM rbh
DNA-damage-inducible protein D
DNA-damage-inducible protein D {ECO:0000313|EMBL:AEM48296.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" sourc
scnpilot_p_inoc_scaffold_48_476
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(604973..608041)
DNA (3069bp) protein (1023aa)
Type III restriction enzyme, res subunit n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I0R5_DESAP rbh
Type III restriction enzyme, res subunit {ECO:0000313|EMBL:ACA58761.1}; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulf
type III restriction enzyme, res subunit
scnpilot_p_inoc_scaffold_48_477
unknown

Not on your lists

608954..609232
DNA (279bp) protein (93aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_48_478
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(609531..611612)
DNA (2082bp) protein (694aa)
TonB-dependent copper receptor NosA n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HTD8_RUBGI
nosA; TonB-dependent copper receptor NosA
TonB-dependent copper receptor NosA {ECO:0000313|EMBL:BAL96275.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (st
scnpilot_p_inoc_scaffold_48_479
unknown

Not on your lists

611739..612143
DNA (405bp) protein (135aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_48_480
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(612074..612841)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034D01CE
Phosphonomutase {ECO:0000313|EMBL:KGM55776.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH
phosphoenolpyruvate phosphomutase family protein
Displaying items 451-480 of 546 in total

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