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scnpilot_p_inoc_scaffold_48_451

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 561542..562150

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0003826491 similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 186.0
  • Bit_score: 163
  • Evalue 2.30e-37
TetR family transcriptional regulator {ECO:0000313|EMBL:AKC85407.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 190.0
  • Bit_score: 167
  • Evalue 2.20e-38
regulatory protein TetR similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 188.0
  • Bit_score: 162
  • Evalue 1.40e-37

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGCGCGAGGCCGCGATCGAGCTCATGTTCGAAATGGGCTACGCGGTCAGCATGGACGCGGTGGCGCAGCGCGCCGGCTGCTCCAAGCAGACCGTCTATGCGCATTTCGGCAGCAAGGAAGGCCTGTTCCGCAGCGTCGTCAGCGAGCTGCTCGGCCCCATAGGCGCCAACCTCGAGCCCGACTGCGAAAACCTGGAAGCCGCATTGCGCCGGTTCGCGCGCGCCCATCTCGAACATCTGGCCGAGCCGCGCACCGTCACCGCCATACGCATGCTGACCACCGACATCGCGCGTTTTCCCGAAGAAGCCAGGGCCTTGTTCGATGCCGGCGCGCTGTCCATACAGCAGCGCCTGGCCGATTGCCTGGCCGCCGCCGCGGATCGTGGCGAACTCAGGCGTGAAGATCCGTCGGCGCTGGCCGAAATGCTGCTCGGCATGCTGGTCGGTTTCGATATCGACCGCCGCCGCCTCGGCCTGGCCGGTCGCGATACGCCGCAGCAGCGTGCGGACTGGGCCGACCGTGTGATTGACGCCTTCCTGAGAGCGTATCGTGTGCCCGCGGCCGGCAGTTCCCCGTCTACAACAACCTCGTCAAGGATGCCCTCATGA
PROTEIN sequence
Length: 203
MREAAIELMFEMGYAVSMDAVAQRAGCSKQTVYAHFGSKEGLFRSVVSELLGPIGANLEPDCENLEAALRRFARAHLEHLAEPRTVTAIRMLTTDIARFPEEARALFDAGALSIQQRLADCLAAAADRGELRREDPSALAEMLLGMLVGFDIDRRRLGLAGRDTPQQRADWADRVIDAFLRAYRVPAAGSSPSTTTSSRMPS*