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scnpilot_p_inoc_scaffold_258

Search features with annotation key words

Displaying items 91-115 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_258_91
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98260..99195)
DNA (936bp) protein (312aa)
Ku domain-containing protein n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00036149AC rbh
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" so
DNA-binding protein
scnpilot_p_inoc_scaffold_258_92
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99279..99494)
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WP02_PSEUU
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADV25901.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pse
scnpilot_p_inoc_scaffold_258_93
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99533..102769)
DNA (3237bp) protein (1079aa)
Trehalose synthase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UTA4_PSEUP
trehalose synthase
Trehalose synthase {ECO:0000313|EMBL:AER57350.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomona
scnpilot_p_inoc_scaffold_258_94
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102766..104229)
DNA (1464bp) protein (488aa)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) {ECO:0000256|RuleBase:RU362045}; EC=2.4.1.15 {ECO:0000256|RuleBase:RU362045};; Osmoregulatory trehalose synthesis protein A {ECO:0000256|RuleBase
Trehalose-6-phosphate synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGS1_9GAMM
alpha,alpha-trehalose-phosphate synthase
scnpilot_p_inoc_scaffold_258_95
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104380..105165
DNA (786bp) protein (262aa)
trehalose-phosphatase (EC:3.1.3.12); K01087 trehalose 6-phosphate phosphatase [EC:3.1.3.12] Tax=GWA2_Rhodocyclales_65_20_curated
trehalose-phosphatase (EC:3.1.3.12)
Trehalose-phosphatase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A2H1_STAND
scnpilot_p_inoc_scaffold_258_96
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105162..105968
DNA (807bp) protein (269aa)
Metal-dependent hydrolase n=1 Tax=Variovorax sp. CF313 RepID=J2T599_9BURK
Metal-dependent hydrolase {ECO:0000313|EMBL:EJL73212.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF31
putative endonuclease/exonuclease/phosphatase
scnpilot_p_inoc_scaffold_258_97
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105965..107143
DNA (1179bp) protein (393aa)
Cardiolipin synthase B {ECO:0000256|HAMAP-Rule:MF_01917}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01917};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01917};; TaxID=1121013 species="Bacteria; Proteoba
hypothetical protein n=1 Tax=Pseudomonas luteola RepID=UPI0002E0F0F6
ybhO; Putative cardiolipin synthetase
scnpilot_p_inoc_scaffold_258_98
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107130..108083
DNA (954bp) protein (318aa)
Membrane protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HT14_PSEUO
Uncharacterized protein {ECO:0000313|EMBL:KFN45702.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas compost
hypothetical protein
scnpilot_p_inoc_scaffold_258_99
Deinococcus sp. RL, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(108096..108812)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. HDIP04 RepID=T0HNS1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEF33885.1}; TaxID=1489678 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus sp. RL.;"
hypothetical protein
scnpilot_p_inoc_scaffold_258_100
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108875..109459)
DNA (585bp) protein (195aa)
Putative outer membrane protein n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BIS6_9XANT
Membrane protein {ECO:0000313|EMBL:KHM90859.1}; TaxID=56460 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria.;"
hypothetical protein
scnpilot_p_inoc_scaffold_258_101
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109560..112127)
DNA (2568bp) protein (856aa)
ATP-dependent DNA ligase n=1 Tax=Xanthomonas sacchari RepID=UPI000262AB24 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN48259.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas compost
lig3; ATP-dependent DNA ligase
scnpilot_p_inoc_scaffold_258_102
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112183..112806)
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003052703
Uncharacterized protein {ECO:0000313|EMBL:KGQ20477.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdone
hypothetical protein
scnpilot_p_inoc_scaffold_258_103
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112871..114187)
DNA (1317bp) protein (439aa)
Two-component response regulator {ECO:0000313|EMBL:KGQ18200.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacte
Sigma 54-dependent transcriptional activator containing CheY-like receiver domain id=2521426 bin=GWF1_Xanthomonadales_69_6 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
transcriptional regulator
scnpilot_p_inoc_scaffold_258_104
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114584..115027
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Janthinobacterium lividum RepID=UPI000287E709
putative uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:CDG82048.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobact
scnpilot_p_inoc_scaffold_258_105
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115272..118736
DNA (3465bp) protein (1155aa)
two component hybrid sensor histidine kinase/response regulator protein (EC:2.7.3.-)
Two component hybrid sensor histidine kinase/response regulator protein n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0G9Q2_9BURK rbh
Two component hybrid sensor histidine kinase/response regulator protein {ECO:0000313|EMBL:EOA05397.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobactera
scnpilot_p_inoc_scaffold_258_106
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118733..119569
DNA (837bp) protein (279aa)
MCP methyltransferase, CheR-type n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MD75_ACIET rbh
CheR-type MCP methyltransferase
MCP methyltransferase, CheR-type {ECO:0000313|EMBL:ACM32107.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax eb
scnpilot_p_inoc_scaffold_258_107
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119569..120159
DNA (591bp) protein (197aa)
cheB; protein-glutamate methylesterase (EC:3.1.1.61)
Protein-glutamate methylesterase protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8J276_HERSS
Chemotaxis protein CheB {ECO:0000313|EMBL:KJA10017.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
scnpilot_p_inoc_scaffold_258_108
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120156..121298
DNA (1143bp) protein (381aa)
Two-component hybrid sensor and regulator n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2S9W5_9DELT rbh
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:KFE70722.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangi
sensor protein
scnpilot_p_inoc_scaffold_258_109
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(121531..122277)
DNA (747bp) protein (249aa)
Prolyl 4-hydroxylase, alpha subunit n=2 Tax=Burkholderia multivorans RepID=B9BRA5_9BURK
oxygenase, catalysing oxidative methylation of damaged DNA family protein
2OG-Fe(II) oxygenase superfamily protein {ECO:0000313|EMBL:AJX75426.1}; TaxID=1249472 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomall
scnpilot_p_inoc_scaffold_258_110
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122443..122994)
DNA (552bp) protein (184aa)
N-acetyltransferase GCN5 n=1 Tax=Thauera terpenica 58Eu RepID=S9ZNM6_9RHOO
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EPZ16216.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
histone acetyltransferase HPA2 and related acetyltransferase
scnpilot_p_inoc_scaffold_258_111
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122991..123269)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZRS3_9RHOO
uncharacterized protein conserved in bacteria
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:BAO82862.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadac
scnpilot_p_inoc_scaffold_258_112
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123362..125320)
DNA (1959bp) protein (653aa)
sulfatase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B318B3 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN44241.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
sulfatase
scnpilot_p_inoc_scaffold_258_113
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125478..126155
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B4455A rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN44240.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
scnpilot_p_inoc_scaffold_258_114
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

126155..127396
DNA (1242bp) protein (414aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5DDEA rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN44239.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
signal transduction histidine kinase
scnpilot_p_inoc_scaffold_258_115
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127732..128517)
DNA (786bp) protein (262aa)
ISPsy2, transposase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWN3_9GAMM
Transposase {ECO:0000313|EMBL:EIL87729.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;
Mobile element protein
Displaying items 91-115 of 115 in total

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