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scnpilot_p_inoc_scaffold_258

Search features with annotation key words

Displaying items 31-60 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_258_31
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29538..29819
DNA (282bp) protein (94aa)
RNA-binding protein Hfq n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW35_9GAMM
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhoda
RNA-binding protein Hfq
scnpilot_p_inoc_scaffold_258_32
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29858..31153
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036DEA46
GTP-binding proten HflX
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_p_inoc_scaffold_258_33
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31555..32613
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000379AF5B rbh
Membrane protein {ECO:0000313|EMBL:KGI77353.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
HflK protein
scnpilot_p_inoc_scaffold_258_34
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32610..33473
DNA (864bp) protein (288aa)
Protein HflC n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPB8_9GAMM
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip
membane protease HflC
scnpilot_p_inoc_scaffold_258_35
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33477..33668
DNA (192bp) protein (64aa)
Putative uncharacterized protein id=2755083 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:KFN41860.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae
hypothetical protein
scnpilot_p_inoc_scaffold_258_36

Not on your lists

33737..35029
DNA (1293bp) protein (431aa)
Adenylosuccinate synthetase {ECO:0000313|EMBL:EQD31273.1}; EC=6.3.4.4 {ECO:0000313|EMBL:EQD31273.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=2 Tax=root RepID=T0YDP1_9ZZZZ rbh
scnpilot_p_inoc_scaffold_258_37
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35103..35531
DNA (429bp) protein (143aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIR4_9GAMM
Lactoylglutathione lyase {ECO:0000313|EMBL:KGM57040.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arsenic
lactoylglutathione lyase
scnpilot_p_inoc_scaffold_258_38
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35586..36143)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00036756CB
Uncharacterized protein {ECO:0000313|EMBL:KJU75328.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoal
hypothetical protein
scnpilot_p_inoc_scaffold_258_39
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36595..39150
DNA (2556bp) protein (852aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1217721 species="Bacteria; Proteobacteria; Gam
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000361CE44 rbh
exoribonuclease R
scnpilot_p_inoc_scaffold_258_40
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39147..39887
DNA (741bp) protein (247aa)
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB {ECO:0000256|HAMAP-Rule:MF_01887}; EC=2.1.1.185 {ECO:0000256|HAMAP-Rule:MF_01887};; 23S rRNA (guanosine2251 2'-O)-methyltransferase {ECO:0000256|HAMAP
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003603C84 rbh
23S rRNA methyltransferase
scnpilot_p_inoc_scaffold_258_41
unknown

Not on your lists

comp(40485..40838)
DNA (354bp) protein (118aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_258_42
unknown

Not on your lists

comp(41041..41484)
DNA (444bp) protein (148aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_258_43
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(41615..44191)
DNA (2577bp) protein (859aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000377E9C5
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG88777.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_p_inoc_scaffold_258_44
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(44175..44759)
DNA (585bp) protein (195aa)
RNA polymerase, sigma subunit, ECF family n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKR0_CHLTF
RNA polymerase, sigma subunit, ECF family
RNA polymerase, sigma subunit, ECF family {ECO:0000313|EMBL:AEP13667.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium
scnpilot_p_inoc_scaffold_258_45
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45035..46510)
DNA (1476bp) protein (492aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000301C3E2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX16204.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
scnpilot_p_inoc_scaffold_258_46
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46511..46843)
DNA (333bp) protein (111aa)
pterin-4a-carbinolamine dehydratase (EC:4.2.1.96)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetra
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Rhodanobacter denitrificans RepID=I4WXG8_9GAMM
scnpilot_p_inoc_scaffold_258_47
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46948..47559
DNA (612bp) protein (204aa)
Fe/S biogenesis protein NfuA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6T5_9GAMM rbh
thioredoxin-like protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
thioredoxin-like protein
scnpilot_p_inoc_scaffold_258_48
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47631..47981)
DNA (351bp) protein (117aa)
cytochrome C n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B335BF
Uncharacterized protein {ECO:0000313|EMBL:KFN44476.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
cytochrome C
scnpilot_p_inoc_scaffold_258_49
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48000..48323)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003716DF3
cytochrome c553 Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
cytochrome C
scnpilot_p_inoc_scaffold_258_50
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48615..49832
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036467E3 rbh
Hemolysin D {ECO:0000313|EMBL:AHY59314.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophi
czcB; cation efflux system protein
scnpilot_p_inoc_scaffold_258_51
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49829..53128
DNA (3300bp) protein (1100aa)
Acriflavin resistance protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSK9_PSEUU
acriflavin resistance protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_p_inoc_scaffold_258_52
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53125..56199
DNA (3075bp) protein (1025aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037157C6 rbh
acriflavin resistance protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_p_inoc_scaffold_258_53
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56466..57122
DNA (657bp) protein (219aa)
Biopolymer transport protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W027_9GAMM
biopolymer transporter ExbB
Biopolymer transporter ExbB {ECO:0000313|EMBL:AHX12740.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningen
scnpilot_p_inoc_scaffold_258_54
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57119..57550
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036A8607
biopolymer transport protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
biopolymer transport protein
scnpilot_p_inoc_scaffold_258_55
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57547..59304
DNA (1758bp) protein (586aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria;
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036BA466 rbh
lipid A export permease/ATP-binding protein MsbA
scnpilot_p_inoc_scaffold_258_56
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59304..60281
DNA (978bp) protein (326aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO
Tetraacyldisaccharide 4'-kinase n=1 Tax=Rhodanobacter denitrificans RepID=M4NP94_9GAMM
tetraacyldisaccharide 4''-kinase
scnpilot_p_inoc_scaffold_258_57
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60363..61934
DNA (1572bp) protein (524aa)
UPF0061 protein UU9_07049 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTK1_9GAMM
UPF0061 protein UU9_07049 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
hypothetical protein
scnpilot_p_inoc_scaffold_258_58
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62155..63324
DNA (1170bp) protein (390aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN44394.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae
Phosphate-selective porin O and P id=2616549 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
phosphate-selective porin O and P
scnpilot_p_inoc_scaffold_258_59
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63460..64557
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003612462 rbh
family 2 glycosyl transferase
Glycosyl transferase (Family 2) {ECO:0000313|EMBL:ABF12477.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia m
scnpilot_p_inoc_scaffold_258_60
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64613..66445)
DNA (1833bp) protein (611aa)
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8S0_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:EYR70100.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
hypothetical protein
Displaying items 31-60 of 115 in total

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