ggKbase home page

scnpilot_p_inoc_scaffold_258_39

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 36595..39150

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1217721 species="Bacteria; Proteobacteria; Gam similarity UNIPROT
DB: UniProtKB
  • Identity: 69.5
  • Coverage: 770.0
  • Bit_score: 1074
  • Evalue 0.0
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000361CE44 similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 819.0
  • Bit_score: 1130
  • Evalue 0.0
  • rbh
exoribonuclease R similarity KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 770.0
  • Bit_score: 1074
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dyella japonica → Dyella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2556
ATGAAGAAAACACGGACTACGACCCCCTCGCGCGCCAGCGCAAAGAAATCATCCGCCGCGCGTCCCGGCTGGATGCCGGACGCAACCGCGTCCAGACGCGGCAAGCCCGCCGTCGCGCCGTCGCCGGGCGCCGCGGCGCCGAAACCCTCGGCACAGCGCAAGATGGCCGTCATCGCCGCGGCCGCGGCGACGGCGAAATCGGGCAAGGGCGCCGCCGACGCTGCGCCGCCGGCGCGCAAGCGCGCGGCGACGGACGAAACCCCGCGTTCGCGTGCGGCGCCGAAAACGCCGGCCGATGCGCCGCGCGCGCGCGCGGCGGCAGCGGAAATGCCGGCAAAGCCGCGCAAGGGCATCAACGCGGCGACCGGCGCGCAGCTGCCCGATCCGCATGCCGAGCGCGAGCAGCAGCGTTACGAACACCCGATTCCGAGCCGCGAGGCGATCCTCGCGTTCCTGACCGAGCAGGGACAGCTCATGAACGCCGAGGCCATCGCCAAGGCGCTCGCGCTGACCCACGAGCGCGACTTCGGCGCGCTGACCAAGCGGCTGGCAGCGATGCTGCGCGACGGCCAGCTGATCCAGAATCGCCGCGGCGGCTACGGCGTGGCGCAGAAGCTCGATCTCGTGCCCGGCGTCGTGCTCGCCAATCCCGACGGCTACGGCTTCCTCAAGCCCGATGCCGGCGGCGAAGACCTGTATCTGTCGCCGTATGAAATGCGCAAGGTGCTGCACGGCGACCGCGTGCTCGGCAGTATCGTCGGCGTCGACCGCCGCGGCCGGCGCCAGGGCGCGATCGTCGAGGTGCTGGAGCGGCGTTCGCCGCGTCTGGTCGGCCGCATCGTCGAACAGGACGGCCTCGTGCTCGTCTCGCCCGACGACCGCCGTGTGCACCAGGATATCCTGATCGCGCCGGGCAAGGATCTCGGCGCGCGCTCGGGCCAGATCGTCGTCGCCGAGATCACCGAGCCGCCGGGCCTGCACCGCGGTCCGATCGGCCGCGTGCTGGCCGTGCTCGGCGAGCGGCTGACGCCGTCGCTGATCGTCGAGATGGCGATCGCCAGTCACGACATTCCGCACGAATGGCCCGACGCTGCATTGCGCGAAGCGGCGCAGGTCGAGCCCGAAGTCACCGCAGCCGAGATCGCCGGCCGCAAGGATCTGCGCGGCCTGCCGCTCGTCACGATCGACGGCGAGGACGCGCGCGACTTCGACGACGCCGTGTTCGCCGAGCCGGTGCCCGGCGGCTTCCGCCTCGTCGTGGCCATCGCCGATGTCTCGCACTACGTGCAGCCCGACAGCGCGCTCGACGACGAAGCCTACAAGCGCGCGACCTCGGTGTATTTCCCGGGCTTCGTCGTGCCGATGCTGCCGGAGACCCTGTCCAACGGCATCTGCTCGCTGAACCCGAAGGTCGAGCGCCTGTGCATGGTCTGCGACATGCAGGTCGACCACGACGGCGAAGTGACGAAATCCAAGTTCTATCCGGCCGTCATGCGTTCGCATGCGCGTCTGACCTACAACCAGGTCTGGCGTGCGCTCGGCGAGAAGGACGCCGCGGCGCGTGCGCAGATCGGCAATCTGATGCCGCATATTGAACATCTGTACCAGCTCTACAAGGTGCTGGCCAAGGCGCGCAAGAAGCGCGGCGCGATCGACTTCGAGAGCGCCGAGGTCAAGTTCCGTCTGGCGCCGTCGGGCGAGGTGGTGCAGCTCGGCACCGAGCCGCGCAACGACGCGCACAAGCTCATCGAGGAATGCATGATCGCGGCCAACGTGCAGGCCGCACGCTTCCTGCACAAGCTGCACATTCCGGCGCTGTACCGCGTGCATGAGTCGCCGCCGGAAGGCAAATATCAGGACCTGCTGGAGTTCCTCAAGGACTTCAGCCTGAAGATGCCGCCGGCCGCCGAAGTGGAGCCGGCCGACTTCGCCGGTCTGATCAAGAAGATCCAGAAGCGGCCCGACGCGAGCCTGATCGAGTCGGTGCTGCTGCGTTCGCAGTCGCTGGCGGCCTATCAGCCCGACTGCGGCGGGCATTTCGGACTGGCGCTGGATGCCTATGCGCATTTCACCTCGCCGATCCGGCGCTATCCGGATCTGCTCGTGCACCGCGCGATACGCCATGCGCTGGACAAGGGCAAGCCGGCGAGCTACCGCTATTCGCCGGCGGCGATGGCCAGCATGGCCGTGCACTGCTCCAACTGTGGCCGTCGCGCCGAGGAGGCCGAACGCGACGTCGACGAACGCTACAAGTGCGCCTGGATGGAAAAGCACGTCGGCAGCGAATTCGACGGCATCGTCTCGGGCGTGACCTCGTTCGGCCTGTTCGTCGAGCTGACCGAGTCCAAGGTCACCGGCCTCGTGCACATCACGCAGCTGCCGAACGACTATTACCATTTCGATCCGATACGGCATCTGCTGACCGGCGAGCGCCGCGGCCTGAAGTTCCGTCTCGGCGACGCCGTGCGCATCCAGGTGCTGCGCGCGAGCCTCGAGGAACGCAAGATTGATTTCCGCCTCGTGGCGGAGGAAACCCAGGAGAAGAAGCGGCGATGA
PROTEIN sequence
Length: 852
MKKTRTTTPSRASAKKSSAARPGWMPDATASRRGKPAVAPSPGAAAPKPSAQRKMAVIAAAAATAKSGKGAADAAPPARKRAATDETPRSRAAPKTPADAPRARAAAAEMPAKPRKGINAATGAQLPDPHAEREQQRYEHPIPSREAILAFLTEQGQLMNAEAIAKALALTHERDFGALTKRLAAMLRDGQLIQNRRGGYGVAQKLDLVPGVVLANPDGYGFLKPDAGGEDLYLSPYEMRKVLHGDRVLGSIVGVDRRGRRQGAIVEVLERRSPRLVGRIVEQDGLVLVSPDDRRVHQDILIAPGKDLGARSGQIVVAEITEPPGLHRGPIGRVLAVLGERLTPSLIVEMAIASHDIPHEWPDAALREAAQVEPEVTAAEIAGRKDLRGLPLVTIDGEDARDFDDAVFAEPVPGGFRLVVAIADVSHYVQPDSALDDEAYKRATSVYFPGFVVPMLPETLSNGICSLNPKVERLCMVCDMQVDHDGEVTKSKFYPAVMRSHARLTYNQVWRALGEKDAAARAQIGNLMPHIEHLYQLYKVLAKARKKRGAIDFESAEVKFRLAPSGEVVQLGTEPRNDAHKLIEECMIAANVQAARFLHKLHIPALYRVHESPPEGKYQDLLEFLKDFSLKMPPAAEVEPADFAGLIKKIQKRPDASLIESVLLRSQSLAAYQPDCGGHFGLALDAYAHFTSPIRRYPDLLVHRAIRHALDKGKPASYRYSPAAMASMAVHCSNCGRRAEEAERDVDERYKCAWMEKHVGSEFDGIVSGVTSFGLFVELTESKVTGLVHITQLPNDYYHFDPIRHLLTGERRGLKFRLGDAVRIQVLRASLEERKIDFRLVAEETQEKKRR*