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scnpilot_p_inoc_scaffold_258

Search features with annotation key words

Displaying items 1-30 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_258_1
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120..617)
DNA (498bp) protein (166aa)
electron transporter RnfB n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B47622
Electron transport complex subunit B {ECO:0000256|HAMAP-Rule:MF_00463}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="A
electron transport complex protein RnfB
scnpilot_p_inoc_scaffold_258_2
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(637..1263)
DNA (627bp) protein (209aa)
electron transport complex RsxE subunit n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B35A32
Uncharacterized protein {ECO:0000313|EMBL:KFN41157.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
rnfA; Electron transport complex protein RnfA
scnpilot_p_inoc_scaffold_258_3
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1268..3427)
DNA (2160bp) protein (720aa)
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
methionyl-tRNA synthetase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B51EBF rbh
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_p_inoc_scaffold_258_4
unknown

Not on your lists

comp(3576..3812)
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_258_5
unknown

Not on your lists

comp(3945..4412)
DNA (468bp) protein (156aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_258_6
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4557..5648
DNA (1092bp) protein (364aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL37393.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghae
Chromosome partitioning ATPase id=2750032 bin=GWF1_Xanthomonadales_69_6 species=Rhodanobacter sp. 115 genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
ATPase
scnpilot_p_inoc_scaffold_258_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5745..6314
DNA (570bp) protein (190aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=666685 species="B
deoxycytidine triphosphate deaminase n=1 Tax=Rudaea cellulosilytica RepID=UPI00037072DE rbh
deoxycytidine triphosphate deaminase
scnpilot_p_inoc_scaffold_258_8
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6433..6837
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000372E0E8
Uncharacterized protein {ECO:0000313|EMBL:KGI77323.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
hypothetical protein
scnpilot_p_inoc_scaffold_258_9
unknown

Not on your lists

6896..7210
DNA (315bp) protein (105aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_258_10
unknown

Not on your lists

7316..8062
DNA (747bp) protein (249aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_258_11
unknown

Not on your lists

8289..9005
DNA (717bp) protein (239aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_258_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9463..10119)
DNA (657bp) protein (219aa)
pcp; pyrrolidone-carboxylate peptidase (5-oxoprolyl-peptidase); K01304 pyroglutamyl-peptidase [EC:3.4.19.3] id=5079169 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
pcp; pyrrolidone-carboxylate peptidase (5-oxoprolyl-peptidase); K01304 pyroglutamyl-peptidase [EC:3.4.19.3] Tax=GWE1_Burkholderiales_65_30_curated
Pyrrolidone-carboxylate peptidase (EC:3.4.19.3)
scnpilot_p_inoc_scaffold_258_13
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10116..11087)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036982FE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF46188.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_258_14
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11084..11764)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000382979C
membrane protein
Membrane protein {ECO:0000313|EMBL:AIF46187.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_258_15
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11761..12534)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000370314B rbh
LamB/YcsF family protein
UPF0271 protein HY57_02415 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica
scnpilot_p_inoc_scaffold_258_16
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12522..13499)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D3F38
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF46185.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_258_17
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13496..14212)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D3F38
allophanate hydrolase
Allophanate hydrolase {ECO:0000313|EMBL:AHX15480.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_p_inoc_scaffold_258_18
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14209..14634)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003604AAF
Uncharacterized protein {ECO:0000313|EMBL:KGI77322.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
histidine triad (HIT) protein
scnpilot_p_inoc_scaffold_258_19
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14631..15302)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034CF8FB
carboxymethylenebutenolidase
Carboxymethylenebutenolidase {ECO:0000313|EMBL:AHX13833.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangninge
scnpilot_p_inoc_scaffold_258_20
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15528..17693)
DNA (2166bp) protein (722aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003697FD8
Uncharacterized protein {ECO:0000313|EMBL:KGI77321.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
diguanylate cyclase/serine/threonine protein kinase
scnpilot_p_inoc_scaffold_258_21
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18041..19360
DNA (1320bp) protein (440aa)
ribosomal protein S12 methylthiotransferase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B52A75 rbh
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase
rimO; ribosomal protein S12 methylthiotransferase
scnpilot_p_inoc_scaffold_258_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19372..20202
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLD5_9GAMM
Protein of unknown function (DUF3025)
Uncharacterized protein {ECO:0000313|EMBL:AGG88482.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter de
scnpilot_p_inoc_scaffold_258_23
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20187..20690)
DNA (504bp) protein (168aa)
Transcription elongation factor GreB n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UCA7_XANAP
greB; transcription elongation factor greb (transcript cleavage factor greb) protein
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteoba
scnpilot_p_inoc_scaffold_258_24
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20957..22432
DNA (1476bp) protein (492aa)
rhomboid family membrane protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI000374AA68
NODE_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ98372.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lyso
integral membrane protein
scnpilot_p_inoc_scaffold_258_25
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22728..23636
DNA (909bp) protein (303aa)
cytochrome C551 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B668B1 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN41209.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
cytochrome C551
scnpilot_p_inoc_scaffold_258_26
unknown

Not on your lists

comp(23806..24534)
DNA (729bp) protein (243aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_258_27
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24658..25158)
DNA (501bp) protein (167aa)
Starvation-inducible outer membrane lipoprotein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VVL6_9GAMM
Starvation-inducible outer membrane lipoprotein {ECO:0000313|EMBL:EIL91257.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;"
starvation-inducible outer membrane lipoprotein
scnpilot_p_inoc_scaffold_258_28
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25155..25898)
DNA (744bp) protein (248aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=266117 specie
NAD-dependent protein deacylase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWC3_RUBXD
silent information regulator protein Sir2
scnpilot_p_inoc_scaffold_258_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26085..28235
DNA (2151bp) protein (717aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW37_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL91428.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
Peptidase S46
scnpilot_p_inoc_scaffold_258_30
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28489..29415
DNA (927bp) protein (309aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034CFF1E rbh
tRNA dimethylallyltransferase
Displaying items 1-30 of 115 in total

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