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scnpilot_p_inoc_scaffold_258_23

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(20187..20690)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreB n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UCA7_XANAP similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 166.0
  • Bit_score: 245
  • Evalue 2.90e-62
greB; transcription elongation factor greb (transcript cleavage factor greb) protein similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 166.0
  • Bit_score: 245
  • Evalue 8.20e-63
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteoba similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 166.0
  • Bit_score: 245
  • Evalue 4.10e-62

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Taxonomy

Xanthomonas albilineans → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
ATGGGACGCTGGCGTCCGCCGCAAGCCGCTTCCACCGCGCTGATCACGCGTGCCGGCCACGACCGGCTCAAGGCCGAGCTCGATCATCTGTGGCGCGAGCGCCGGCCCGAGGTCGTCCGCGCGCTGGCCGCCGCCGCGGCCGAGGGCGACCGTTCGGAGAACGCCGAATACACCTACCGCAAGAAGCAGCTCGGCGAGATCGACCGCCGCGTGCGCTATCTCGGCAAGCGCCTGGAAACCCTGAAGATCTCGCCGGATGCGCCGACCGACCGCGCGGCCGTCTATTTCGGCGCCTGGATCACGCTCGAAGACGAACACGGCCACGAGAAGCGCTACCGCATCGTCGGCCCCGACGAGACCGATGCCGCACGCGGCTGGATCAGCATCGATTCGCCGCTGGCCCGCGCCGTACTGAAAAAGCGCATCGACGACGAGTTCGCCGCCGAACTCCCCGACACTCGCGCAAGCTTCGTCGTCGTCGACATCCGCTACGGCGAGGAATAA
PROTEIN sequence
Length: 168
MGRWRPPQAASTALITRAGHDRLKAELDHLWRERRPEVVRALAAAAAEGDRSENAEYTYRKKQLGEIDRRVRYLGKRLETLKISPDAPTDRAAVYFGAWITLEDEHGHEKRYRIVGPDETDAARGWISIDSPLARAVLKKRIDDEFAAELPDTRASFVVVDIRYGEE*