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scnpilot_p_inoc_scaffold_258_24

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 20957..22432

Top 3 Functional Annotations

Value Algorithm Source
rhomboid family membrane protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI000374AA68 similarity UNIREF
DB: UNIREF100
  • Identity: 41.9
  • Coverage: 494.0
  • Bit_score: 348
  • Evalue 9.30e-93
NODE_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ98372.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lyso similarity UNIPROT
DB: UniProtKB
  • Identity: 41.6
  • Coverage: 495.0
  • Bit_score: 352
  • Evalue 1.20e-93
integral membrane protein similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 496.0
  • Bit_score: 315
  • Evalue 2.50e-83

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Taxonomy

Lysobacter sp. A03 → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1476
GTGCTGATATTGCCGCTGCACCGTCCGTTGAACCGGGCGAATTTTCCGTTCGCGACCATGTCCCTGGTCGTGATCAATGTATTCGTGTTCCTGTTCCTGCAGAGCGGCGACGGCGCGGCGCTGCAGCGTGCCGCGCACTACTACGGCGAGGCCGGGCTCGCGCAGATCGAGCTGCCGCTGTACCGCGACTGGCGCCAGGCGAATCCGCAGCCGCGGCTGGACGAACTGCTGCCGCATCTGGACGAGCTGCCGCAGGAACAGCTCGTGAGCCTGCTGCAGGCCGACGCGCACTTCCTGCGCGCGCTGCACGAGAACGCGCTGATCGGCGAACAGGATCCGCGGCATGCCCAGTGGAAGCTGCACCGCGACGAATTCGAGCGGCTGTGGCAGCGCCAGTTCACCGAGCGCCACGTGCTGCGCTATTCCGAACTCGATCCGCTGCGCGTACTGAGCTCGATGTTCCTGCATGGCGGCTTCGGCCATCTGTTCGGCAACATGCTGTTCCTCGTCGTGCTCGGCCTGCTGGTCGAAGGCGCGCTCGGCGCCGGTCTGTTCCTGGGCCTGTACCTGCTTGCCGGTTGCGGCGCCGCGCTGACCGCGCTGGCTTATCGCTGGGGCGATGTCGGCGCGATGCTCGGCGCTTCGGGCGCGATCGCCGGCCTCATGGGCGCCTATTGCGTGCTCTGGGGCACGCGCCAGGTGCGCGTGTTCTGGTGGGCCTTCGTCGCGTTCGGCTATTCGCGCATCACGGCGCTGTGGCTGCTGCCGTTCTGGCTCGGCTGGGAACTGTTCAACCTGATGGCCAACGCCGGGGCCGGTGTGGGCTTCGACGCGCATGCCGGCGGCATCGTCAGCGGCGCCCTGCTCGCGCTGGGCGTGCGCAGCCTGGGCTGGGAGCAGCGCGAGTTCCTCGACGCCGACGAGAAGGCCGATCAGGCCAAGGCCGCCGGCGATGCGCTGGAACGTGCGCTGCAGCATCTGGGCCGGCTCGAAACACGTCAGGCGCTGGCGCTGCTGGAACCGCTGGACCGCGCCGGCGCGCCGTCGCTGGATGTGCGCATCGCGCTGTACCGCTGCGCGCGCTACGCCAACCAGCCGGCGGCGCTGCGTGCGGCGCTGGCGCGCGTGATCGAGCTGCCGCTGGCCGATGCGGCCGCGGCGCGCAAGGTCAAGCAGGTCGTCGACGACTACCGCAAGGTCGATGCGGCCGGCATCGACCTGCCGCCGCCGCAGCAACTGCAGCTGGCGCGGGCGTGGCTGCGCATAGGCGCGGATACGGATGCCGAGCAGCTTGCGCGCGACCTCGGCGCGCGCGCGGCCGATCTGCCGGGTCTGGCCGAGCTGTGCTGGCAGCTGGCCCAGCGCGCGCGCGAAGGCTCGCCGCAATGGCGCGCGCGATTGCAGCTGATCGCCAGCCATTGCCCGCGCAGCGAACTTGCGCCGAAGGCGGCGTTCCTGCTCGCGCAGACCCCGTAG
PROTEIN sequence
Length: 492
VLILPLHRPLNRANFPFATMSLVVINVFVFLFLQSGDGAALQRAAHYYGEAGLAQIELPLYRDWRQANPQPRLDELLPHLDELPQEQLVSLLQADAHFLRALHENALIGEQDPRHAQWKLHRDEFERLWQRQFTERHVLRYSELDPLRVLSSMFLHGGFGHLFGNMLFLVVLGLLVEGALGAGLFLGLYLLAGCGAALTALAYRWGDVGAMLGASGAIAGLMGAYCVLWGTRQVRVFWWAFVAFGYSRITALWLLPFWLGWELFNLMANAGAGVGFDAHAGGIVSGALLALGVRSLGWEQREFLDADEKADQAKAAGDALERALQHLGRLETRQALALLEPLDRAGAPSLDVRIALYRCARYANQPAALRAALARVIELPLADAAAARKVKQVVDDYRKVDAAGIDLPPPQQLQLARAWLRIGADTDAEQLARDLGARAADLPGLAELCWQLAQRAREGSPQWRARLQLIASHCPRSELAPKAAFLLAQTP*