ggKbase home page

scnpilot_p_inoc_scaffold_258_44

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(44175..44759)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma subunit, ECF family n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKR0_CHLTF similarity UNIREF
DB: UNIREF100
  • Identity: 47.0
  • Coverage: 185.0
  • Bit_score: 158
  • Evalue 5.40e-36
RNA polymerase, sigma subunit, ECF family similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 185.0
  • Bit_score: 158
  • Evalue 1.50e-36
RNA polymerase, sigma subunit, ECF family {ECO:0000313|EMBL:AEP13667.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium similarity UNIPROT
DB: UniProtKB
  • Identity: 47.0
  • Coverage: 185.0
  • Bit_score: 158
  • Evalue 7.60e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chloracidobacterium thermophilum → Chloracidobacterium → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGTCCTCGATCACGGAACTGCTCGATCGCTGGAAACGCGGCGATCGCAGCGTCGAAGATGCGTTGGCCACCGATATCTATCCGGTGCTGCGCGAGCTCGCGCGTGCCCAGGTCCGGCGTCATGGCGGCGCCCTGACCCTGCGCGCGACCGAGCTGGCCAACGAAGCCTATGAGCGCCTGCATGCGCAGCAGGGCGTGAACTGGCAGAACCGCGCGCATTTCCATGCGATTGCGGCGACCTTGATGCGCCGCGTCGTGGTGGACTATCTGCGCGAACGCCAGGCCGAGAAGCGCGGCGGCGACCAGCTGTTCATCGCGCTGGACGACATGAGCCAGCGCGAGGCGCCGTCGCAGGGCGACCATGTCGACTGGCTCGCCGTCGACCAGGCACGGACCGAATTCGCCCAGGCAGCGCCCGAAGCCGCACGCGTGGTCGAGCTGCGCCTGTTCTCGGGGCTGACCAAGGAAGAAATTGCCGAGGTCTGCGGCTCGTCGCGCGCCACGGTCGGCCGGCAATGGCGCTTCGCGCGCGCCTGGCTGGCGGAACGGCTCGACGTAGTGCCCGGCGATGAAGACGCCGGCTGA
PROTEIN sequence
Length: 195
MSSITELLDRWKRGDRSVEDALATDIYPVLRELARAQVRRHGGALTLRATELANEAYERLHAQQGVNWQNRAHFHAIAATLMRRVVVDYLRERQAEKRGGDQLFIALDDMSQREAPSQGDHVDWLAVDQARTEFAQAAPEAARVVELRLFSGLTKEEIAEVCGSSRATVGRQWRFARAWLAERLDVVPGDEDAG*