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scnpilot_p_inoc_scaffold_289

Search features with annotation key words

Displaying items 61-87 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_289_61
unknown

Not on your lists

85479..85658
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_289_62
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85819..86859
DNA (1041bp) protein (347aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
Signal transduction histidine kinase, nitrogen specific n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQI6_9GAMM rbh
histidine kinase
scnpilot_p_inoc_scaffold_289_63
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86852..88255
DNA (1404bp) protein (468aa)
nitrogen regulation protein NR(I) n=1 Tax=Dyella japonica RepID=UPI0002FA5B28
Chemotaxis protein CheY {ECO:0000313|EMBL:KGI79142.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
chemotaxis protein CheY
scnpilot_p_inoc_scaffold_289_64
unknown

Not on your lists

88857..89624
DNA (768bp) protein (256aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_289_65
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89744..90211
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000307EAEB
N-acetyltransferase GCN5 {ECO:0000313|EMBL:GAN45148.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibac
GCN5 family acetyltransferase
scnpilot_p_inoc_scaffold_289_66
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90640..91233)
DNA (594bp) protein (198aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|
GTP cyclohydrolase I n=1 Tax=Xanthomonas arboricola RepID=UPI0002EAC937
folE; GTP cyclohydrolase I
scnpilot_p_inoc_scaffold_289_67
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91289..92362)
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B44DA4
Uncharacterized protein {ECO:0000313|EMBL:KFN43978.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
scnpilot_p_inoc_scaffold_289_68
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92489..93160)
DNA (672bp) protein (224aa)
DNA repair protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WGW7_9GAMM
DNA repair protein
DNA repair protein {ECO:0000313|EMBL:AGG90906.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitri
scnpilot_p_inoc_scaffold_289_69
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93280..94512
DNA (1233bp) protein (411aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:AGG90905.1}; EC=4.1.1.36 {ECO:0000313|EMBL:AGG90905.1};; EC=6.3.2.5 {ECO:0000313|EMBL:AGG90905.1};; Tax
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Rhodanobacter denitrificans RepID=I4WGW6_9GAMM rbh
scnpilot_p_inoc_scaffold_289_70
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94509..94964
DNA (456bp) protein (152aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23)
deoxyuridine 5''''-triphosphate nucleotidohydrolase n=1 Tax=Rudaea cellulosilytica RepID=UPI000360D4EF
scnpilot_p_inoc_scaffold_289_71
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94987..97434
DNA (2448bp) protein (816aa)
Phosphomannomutase n=1 Tax=Rhodanobacter denitrificans RepID=I4WGW4_9GAMM rbh
Phosphoglucomutase {ECO:0000313|EMBL:GAN45186.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter se
phosphomannomutase
scnpilot_p_inoc_scaffold_289_72
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(97481..100069)
DNA (2589bp) protein (863aa)
WD40 domain protein beta Propeller n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UPA0_ROSS1
WD40 domain-containing protein
WD40 domain protein beta Propeller {ECO:0000313|EMBL:ABQ88453.1}; Flags: Precursor;; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseifle
scnpilot_p_inoc_scaffold_289_73
unknown

Not on your lists

comp(100147..100413)
DNA (267bp) protein (89aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_289_74
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100504..101163)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036FF806
ABC transporter ATPase {ECO:0000313|EMBL:GAN45187.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacte
ABC transporter ATPase
scnpilot_p_inoc_scaffold_289_75
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101230..101874)
DNA (645bp) protein (215aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=
orotate phosphoribosyltransferase n=1 Tax=Dyella ginsengisoli RepID=UPI00034B9782
orotate phosphoribosyltransferase
scnpilot_p_inoc_scaffold_289_76
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101983..103083
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000376DAB0 rbh
Histidine kinase {ECO:0000313|EMBL:EYR68935.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;
hypothetical protein
scnpilot_p_inoc_scaffold_289_77
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103080..103877
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000381C8DA rbh
two-component response regulator; K02477 two-component system, LytT family, response regulator Tax=GWF1_Xanthomonadales_69_6_curated
two component transcriptional regulator, LytTR family
scnpilot_p_inoc_scaffold_289_78
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103998..104648
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0EHN5_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:AKC85770.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxantho
hypothetical protein
scnpilot_p_inoc_scaffold_289_79
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104631..105755)
DNA (1125bp) protein (375aa)
Putative helix-turn-helix-domain containing protein, AraC type n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LAE6_9GAMM rbh
Putative helix-turn-helix-domain containing protein, AraC type {ECO:0000313|EMBL:EED39273.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; St
Helix-turn-helix, AraC domain-containing protein
scnpilot_p_inoc_scaffold_289_80
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106035..109133
DNA (3099bp) protein (1033aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035CFFBF rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN51055.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas compost
AcrB/AcrD/AcrF family protein
scnpilot_p_inoc_scaffold_289_81
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109156..110211
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036AA704 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN51054.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas compost
RND family efflux transporter MFP subunit
scnpilot_p_inoc_scaffold_289_82
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

110285..111064
DNA (780bp) protein (260aa)
exodeoxyribonuclease III; K01142 exodeoxyribonuclease III [EC:3.1.11.2] Tax=GWF1_Xanthomonadales_69_6_curated
Exodeoxyribonuclease III id=2536389 bin=GWF1_Xanthomonadales_69_6 species=Frateuria aurantia genus=Frateuria taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
exodeoxyribonuclease III
scnpilot_p_inoc_scaffold_289_83
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111061..112398
DNA (1338bp) protein (446aa)
Major facilitator superfamily MFS_1 n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K5H0_STEMA
major facilitator superfamily protein
Signal transduction protein {ECO:0000313|EMBL:KDE88756.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas m
scnpilot_p_inoc_scaffold_289_84
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112467..112778
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003477F13
Uncharacterized protein {ECO:0000313|EMBL:GAN45191.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
scnpilot_p_inoc_scaffold_289_85
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112763..113878)
DNA (1116bp) protein (372aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBX3_9GAMM
molecular chaperone
scnpilot_p_inoc_scaffold_289_86
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(113886..115358)
DNA (1473bp) protein (491aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035FF8C9 rbh
Peptidase M23 {ECO:0000313|EMBL:GAN45193.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sedimin
peptidase M23
scnpilot_p_inoc_scaffold_289_87
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115559..116770
DNA (1212bp) protein (404aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:00002
tyrosyl-tRNA synthetase (EC:6.1.1.1)
tyrosyl-tRNA synthetase n=1 Tax=Rudaea cellulosilytica RepID=UPI00036744C9 rbh
Displaying items 61-87 of 87 in total

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