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scnpilot_p_inoc_scaffold_289

Search features with annotation key words

Displaying items 31-60 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_289_31
Burkholderia sp. USM B20, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42465..43376
DNA (912bp) protein (304aa)
Protein FdhE homolog n=1 Tax=Burkholderia cenocepacia KC-01 RepID=V4ZM78_9BURK rbh
Protein FdhE homolog {ECO:0000256|HAMAP-Rule:MF_00611}; TaxID=1571773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp.
formate dehydrogenase accessory protein FdhE
scnpilot_p_inoc_scaffold_289_32
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43378..44802
DNA (1425bp) protein (475aa)
L-seryl-tRNA(Sec) selenium transferase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine sy
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000382105A rbh
scnpilot_p_inoc_scaffold_289_33
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44799..46730
DNA (1932bp) protein (644aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035F9DEE rbh
Translation elongation factor {ECO:0000313|EMBL:KHD19719.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia
selB; selenocysteine-specific translation elongation factor
scnpilot_p_inoc_scaffold_289_34
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46856..47911
DNA (1056bp) protein (352aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:000
Selenide, water dikinase n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WV13_9BURK rbh
segregation protein A
scnpilot_p_inoc_scaffold_289_35
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47965..49368)
DNA (1404bp) protein (468aa)
Transporter {ECO:0000313|EMBL:KGM55664.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.
Citrate transporter id=2528239 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
H+/gluconate symporter family protein
scnpilot_p_inoc_scaffold_289_36
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49529..51769
DNA (2241bp) protein (747aa)
Putative tonB-dependent receptor bfrD n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5CYK8_STEMA rbh
TonB-dependent receptor {ECO:0000313|EMBL:KGM57251.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arsenici
TonB-dependent receptor
scnpilot_p_inoc_scaffold_289_37
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51984..55310
DNA (3327bp) protein (1109aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM55666.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeon
Multi-sensor hybrid histidine kinase id=2528229 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
signal transduction histidine kinase
scnpilot_p_inoc_scaffold_289_38
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55368..55979)
DNA (612bp) protein (204aa)
NODE_78, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ98245.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lys
scnpilot_p_inoc_scaffold_289_39
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

56196..57059
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00031BCDF1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY97295.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (str
scnpilot_p_inoc_scaffold_289_40
unknown

Not on your lists

comp(57318..57572)
DNA (255bp) protein (85aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_289_41
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57779..58438)
DNA (660bp) protein (220aa)
Response regulator gacA n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CMA9_STEMA
LuxR family transcriptional regulator {ECO:0000313|EMBL:KGM52115.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lyso
two component LuxR family transcriptional regulator
scnpilot_p_inoc_scaffold_289_42
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58467..59231)
DNA (765bp) protein (255aa)
3-hydroxybutyrate dehydrogenase n=1 Tax=Xanthomonas sacchari RepID=UPI000262B4EA rbh
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:KGQ19237.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter
3-hydroxybutyrate dehydrogenase
scnpilot_p_inoc_scaffold_289_43
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59478..61169
DNA (1692bp) protein (564aa)
hydrogenase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B63DCE rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM52116.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concret
hydrogenase
scnpilot_p_inoc_scaffold_289_44
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61457..62359)
DNA (903bp) protein (301aa)
membrane protein n=1 Tax=Nevskia ramosa RepID=UPI0003B31D89 rbh
conserved exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CBJ50302.1}; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (
scnpilot_p_inoc_scaffold_289_45
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62571..63332)
DNA (762bp) protein (254aa)
ABC transporter n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2FU92_9GAMM rbh
ABC transport system permease
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax
scnpilot_p_inoc_scaffold_289_46
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63329..64255)
DNA (927bp) protein (309aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PEV7_9DELT rbh
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFG69920.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source
ABC-type multidrug transport system
scnpilot_p_inoc_scaffold_289_47
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64477..66351
DNA (1875bp) protein (625aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036E12AB
Uncharacterized protein {ECO:0000313|EMBL:KGD88116.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp.
peptidase C14 caspase catalytic subunit p20
scnpilot_p_inoc_scaffold_289_48
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

66333..67226
DNA (894bp) protein (298aa)
V8-like Glu-specific endopeptidase n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IZ29_9BACT rbh
serine peptidase
Serine peptidase {ECO:0000313|EMBL:AHF89906.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
scnpilot_p_inoc_scaffold_289_49
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67249..69801)
DNA (2553bp) protein (851aa)
metallophosphoesterase n=1 Tax=Rudaea cellulosilytica RepID=UPI00037BC3BA rbh
Metallophosphoesterase {ECO:0000313|EMBL:AJC47046.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari
metallophosphoesterase rbh
scnpilot_p_inoc_scaffold_289_50
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69825..71225)
DNA (1401bp) protein (467aa)
type 12 methyltransferase n=1 Tax=Rudaea cellulosilytica RepID=UPI000364C71E rbh
methyltransferase type 12
Methyltransferase type 12 {ECO:0000313|EMBL:AJC47047.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacch
scnpilot_p_inoc_scaffold_289_51
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(71261..72298)
DNA (1038bp) protein (346aa)
RNA 3'-terminal-phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal-phosphate cyclase; K01974 RNA 3'-terminal phosphate cyclase [EC:6.5.1.4] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI00036DE6E2
scnpilot_p_inoc_scaffold_289_52
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72327..73025)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036BB657
Variovorax paradoxus strain MEDvA23 contig_54, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27479.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
hypothetical protein
scnpilot_p_inoc_scaffold_289_53
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73042..74265)
DNA (1224bp) protein (408aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonad
RNA-splicing ligase RtcB n=1 Tax=Caulobacter sp. AP07 RepID=J2GFN7_9CAUL rbh
RtcB protein
scnpilot_p_inoc_scaffold_289_54
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74718..76334
DNA (1617bp) protein (539aa)
Fis family transcriptional regulator n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00036E0D67 rbh
Fis family transcriptional regulator {ECO:0000313|EMBL:EYR68424.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysob
transcriptional regulator
scnpilot_p_inoc_scaffold_289_55
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76696..78156)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0ADP7_COLFT rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK63589.1}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivor
scnpilot_p_inoc_scaffold_289_56
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78306..79481)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000349A3D0 rbh
Membrane protease subunit
Membrane protease subunit {ECO:0000313|EMBL:AIY40126.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.
scnpilot_p_inoc_scaffold_289_57
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79848..80678)
DNA (831bp) protein (277aa)
Putative transcriptional regulator n=1 Tax=Caulobacter sp. AP07 RepID=J3A7C0_9CAUL rbh
XRE family transcriptional regulator {ECO:0000313|EMBL:KGF79646.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia
DNA-binding protein
scnpilot_p_inoc_scaffold_289_58
unknown

Not on your lists

81056..81415
DNA (360bp) protein (120aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_289_59
unknown

Not on your lists

comp(81470..81634)
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_289_60
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82151..85117
DNA (2967bp) protein (989aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00036F03B1
Uncharacterized protein {ECO:0000313|EMBL:KDP73309.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="E
hypothetical protein
Displaying items 31-60 of 87 in total

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