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scnpilot_p_inoc_scaffold_289_53

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(73042..74265)

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonad similarity UNIPROT
DB: UniProtKB
  • Identity: 66.4
  • Coverage: 405.0
  • Bit_score: 539
  • Evalue 3.30e-150
RNA-splicing ligase RtcB n=1 Tax=Caulobacter sp. AP07 RepID=J2GFN7_9CAUL similarity UNIREF
DB: UNIREF100
  • Identity: 65.3
  • Coverage: 398.0
  • Bit_score: 539
  • Evalue 4.00e-150
  • rbh
RtcB protein similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 412.0
  • Bit_score: 539
  • Evalue 1.10e-150

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1224
ATGAACACCGCACTGCATCAGACCCTGCACGACGAAGGCGGCGTGCCGATCAAGGCCTGGATCCACGGCGTGCCGCTGGACGACGGCGCCCGCAAGCAGCTGCGCAACCTCGCGCGGCTGCCGATCGTCGGGCCGTGGATCGCCGTCATGCCCGACGTACATCTCGGCATCGGCGCGACCGTAGGCTCGGTGGTGCCGACCGAAGGCGCGATCATCCCGGCCGCCGTCGGCGTCGACATCGGCTGCGGCATGATGGCTTACCAGACCACCCTGCGCGCCGACCAGCTGCCGGAAAACCTGCAGACCATCCGCAGCGACATCGAACGCGCCGTACCGCATGGCTTTGTCACGGTCGAGGGCCGCAGTCTCAAGGGCAACTGGATCGTCGCGCCGAACTCGGCCACGACGCGCTGGCGCGGTCTGGAACAGCGCTACCGCGCGCTGGTCGAGCGCCATCCGCGCATCTCGCACAAGTCGCCGCTGAGCCAGCTCGGCTCGCTCGGCGGCGGCAACCACTTCATCGAACTGTGCCTGGACGAAACCGACCAGGTCTGGGTCATGCTGCATTCGGGCTCGCGCGGCGTCGGCAACGGCATCGGCCAGTACTTCATCGAGAAGGCGCGCAACGAGATGCAGAAGCAGCAGGCCAACCTGCCCGACCGCGACCTGGCCTACTTCAAGGAAGGCAGCGCCGTGTTCGACGACTACGTGCAGGCCGTGGAATGGGCGCAGGAGTACGCCGCCGAGAACCGCCAGCAGATGATGGAAACCGTGCTGAGCGTGCTGCGCAAGCACCTGCCTTCGTTCCAGCTCACGCGCATGGCGATCAACTGCCACCACAACTACGTGCAGCGCGAGACGCATTTCGGCCGCGAGCTTTACGTCACGCGCAAGGGTGCGGTCAGCGCGCGCGAAGGCCAGTTCGGCATCATCCCCGGCAGCATGGGGGCGAAGAGCTTCATCGTGCGCGGCCTCGGCAACGCCGAGAGCTTCTGTTCCTGCTCGCACGGCGCGGGCCGCGTCATGAGCCGCACCGAGGCCAAGAAGCGCATCACGCTCGGCGAACACCGCGAGGCAACCGCACATGTCGAGTGCCGCAAGGACGCCGACGTCATCGACGAGTCGCCGGCCGCCTACAAGCCGATCGACCAGGTCATGGCCGCGCAGCGCGATCTCGTGGAGATCATGCACACCTTGCGGCAGGTCGTCTGCGTCAAGGGTTGA
PROTEIN sequence
Length: 408
MNTALHQTLHDEGGVPIKAWIHGVPLDDGARKQLRNLARLPIVGPWIAVMPDVHLGIGATVGSVVPTEGAIIPAAVGVDIGCGMMAYQTTLRADQLPENLQTIRSDIERAVPHGFVTVEGRSLKGNWIVAPNSATTRWRGLEQRYRALVERHPRISHKSPLSQLGSLGGGNHFIELCLDETDQVWVMLHSGSRGVGNGIGQYFIEKARNEMQKQQANLPDRDLAYFKEGSAVFDDYVQAVEWAQEYAAENRQQMMETVLSVLRKHLPSFQLTRMAINCHHNYVQRETHFGRELYVTRKGAVSAREGQFGIIPGSMGAKSFIVRGLGNAESFCSCSHGAGRVMSRTEAKKRITLGEHREATAHVECRKDADVIDESPAAYKPIDQVMAAQRDLVEIMHTLRQVVCVKG*