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scnpilot_p_inoc_scaffold_289_41

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(57779..58438)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator gacA n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CMA9_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 219.0
  • Bit_score: 292
  • Evalue 2.70e-76
LuxR family transcriptional regulator {ECO:0000313|EMBL:KGM52115.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lyso similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 219.0
  • Bit_score: 378
  • Evalue 6.90e-102
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 219.0
  • Bit_score: 289
  • Evalue 8.50e-76

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Taxonomy

Lysobacter concretionis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGCCTTCGCTGCTGATCGCCGACGATCATCCGCTGTTCCGCGCCGCGCTGCGCGGCGCCGCCGCCGACGCGGTGGCCGGGCTGCAGGTGCACGAAGCCGATTCGCTGGACGGCGTGCTGGGCACCCTGGAGCGCGAGCCGGACATCGACCTGGTCCTGCTCGACCTGCACATGCCCGGCAATCACGGCCTGGCCGGGCTCGCCGCGATCCGCGCCCAGCATCCGGGCGTGGCCGTCGTCGTGGTCTCGGCCAACGACGATCCGCGCGTGGTGCGGCGCGCGCTGGACCACGGCGCCGCGGGTTATCTGCCCAAGAGCTCGGGCCTGGACGAACTGCGCGACGCGATACGTACGGTGCTGGCCTGCGAGCAATGGCTGCCGGCCGTGCTGCGCGGCAGCGTCTCGCGGGCGCAGTCCTCGGCCCAGGATGCGGATCTCGCCGCGCGCCTGGCCAGCCTCTCGCCGCAGCAGTTCCGCGTGCTCGTGCTCGTCGCCGAGGGCCTGCTGAACAAGCAGATCGCCGATCGCCTCGACGTGCAGGAACGCACGGTCAAGGCGCATCTGACGGCGATCTTCGACCGCCTCGGCGTACGCAACCGCACCCAGGCCGGCGTGGTGCTGCGCGAGCTCGAACTCAGCGATCCCGCGCGCCAACTCTGA
PROTEIN sequence
Length: 220
MPSLLIADDHPLFRAALRGAAADAVAGLQVHEADSLDGVLGTLEREPDIDLVLLDLHMPGNHGLAGLAAIRAQHPGVAVVVVSANDDPRVVRRALDHGAAGYLPKSSGLDELRDAIRTVLACEQWLPAVLRGSVSRAQSSAQDADLAARLASLSPQQFRVLVLVAEGLLNKQIADRLDVQERTVKAHLTAIFDRLGVRNRTQAGVVLRELELSDPARQL*