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scnpilot_p_inoc_scaffold_1995

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1995_1
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..365)
DNA (363bp) protein (121aa)
RNA polymerase subunit sigma-24 n=1 Tax=Cupriavidus sp. WS RepID=UPI00036F648B
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CDY77133.1}; RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KDR41946.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Bu
FecI-like sigma-24 factor
scnpilot_p_inoc_scaffold_1995_2
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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552..1475
DNA (924bp) protein (308aa)
Transcriptional regulator, AraC family n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8YYA9_XANCT rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EKU23699.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xa
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_1995_3
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1566..3812)
DNA (2247bp) protein (749aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding id=1262454 bin=GWE1_Burkholderiales_65_30 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_p_inoc_scaffold_1995_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3826..4299)
DNA (474bp) protein (158aa)
iorA; isoquinoline 1-oxidoreductase subunit alpha (EC:1.3.99.16); K07302 isoquinoline 1-oxidoreductase, alpha subunit [EC:1.3.99.16] id=5079893 bin=GWF1_Burkholderiales_GWF1_66_17 species=Ralstonia solanacearum genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
iorA; isoquinoline 1-oxidoreductase subunit alpha (EC:1.3.99.16); K07302 isoquinoline 1-oxidoreductase, alpha subunit [EC:1.3.99.16] Tax=GWE1_Burkholderiales_65_30_curated
(2Fe-2S)-binding protein
scnpilot_p_inoc_scaffold_1995_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4571..5653
DNA (1083bp) protein (361aa)
TRAP dicarboxylate transporter subunit DctP n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MV02_9BURK rbh
TRAP dicarboxylate transporter subunit DctP {ECO:0000313|EMBL:EIK93042.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source
fcbT1; periplasmic protein
scnpilot_p_inoc_scaffold_1995_6
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5770..6708
DNA (939bp) protein (313aa)
Conjugal transfer protein TrbL n=5 Tax=Gammaproteobacteria RepID=U3H4F6_PSEAC
conjugal transfer protein TrbL
Conjugal transfer protein TrbL {ECO:0000313|EMBL:AIG04219.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fl
scnpilot_p_inoc_scaffold_1995_7
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6733..7437
DNA (705bp) protein (235aa)
Conjugal transfer protein TrbF n=1 Tax=Pseudomonas aeruginosa BWHPSA010 RepID=U9MGR0_PSEAI rbh
VirB8 protein {ECO:0000313|EMBL:KDD60173.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU55
conjugal transfer protein TrbF
scnpilot_p_inoc_scaffold_1995_8
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7434..8426
DNA (993bp) protein (331aa)
Conjugal transfer protein TrbG n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IL96_BORPD rbh
trbG1; conjugal transfer protein TrbG rbh
Conjugal transfer protein TrbG {ECO:0000313|EMBL:CAP42557.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petr
scnpilot_p_inoc_scaffold_1995_9
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8429..10117
DNA (1689bp) protein (563aa)
Conjugal transfer protein TrbI n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IL99_BORPD
trbI1; conjugal transfer protein TrbI
Conjugal transfer protein TrbI {ECO:0000313|EMBL:CAP42558.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petr
scnpilot_p_inoc_scaffold_1995_10
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10260..11414
DNA (1155bp) protein (385aa)
NADH-flavin oxidoreductase/NADH oxidase n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39MI6_BURS3 rbh
hypothetical protein rbh
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG22404.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholder
scnpilot_p_inoc_scaffold_1995_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11774..12697
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUZ9_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK93039.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
ornithine cyclodeaminase
scnpilot_p_inoc_scaffold_1995_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12694..13416
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUZ8_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK93038.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
hypothetical protein
scnpilot_p_inoc_scaffold_1995_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13427..14221)
DNA (795bp) protein (265aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUY7_9BURK rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EIK93027.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenopha
enoyl-CoA hydratase
scnpilot_p_inoc_scaffold_1995_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14236..15099)
DNA (864bp) protein (288aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUY6_9BURK rbh
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:EIK93026.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga
L-carnitine dehydratase/bile acid-inducible protein F
scnpilot_p_inoc_scaffold_1995_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15287..16186)
DNA (900bp) protein (300aa)
FadE34 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUY5_9BURK rbh
FadE34 {ECO:0000313|EMBL:EIK93025.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
acyl-CoA dehydrogenase domain protein
scnpilot_p_inoc_scaffold_1995_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16183..17334)
DNA (1152bp) protein (384aa)
Acyl-dehydrogenase {ECO:0000313|EMBL:EIK93024.1}; EC=1.3.8.- {ECO:0000313|EMBL:EIK93024.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrog
Acyl-dehydrogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUY4_9BURK rbh
yngJ; putative acyl-CoA dehydrogenase yngJ
scnpilot_p_inoc_scaffold_1995_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17354..18175)
DNA (822bp) protein (274aa)
Oxidoreductase, short chain dehydrogenase/reductase family n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUY3_9BURK rbh
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:EIK93023.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogeno
fabG; 3-oxoacyl-ACP reductase
scnpilot_p_inoc_scaffold_1995_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18172..19170)
DNA (999bp) protein (333aa)
Extra-cytoplasmic solute receptor n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUY2_9BURK rbh
Extra-cytoplasmic solute receptor {ECO:0000313|EMBL:EIK93022.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogen
h16_A3350; extra-cytoplasmic solute receptor
scnpilot_p_inoc_scaffold_1995_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19212..20147
DNA (936bp) protein (312aa)
Putative IclR-family regulatory protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUY1_9BURK rbh
Putative IclR-family regulatory protein {ECO:0000313|EMBL:EIK93021.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hy
IclR family transcriptional regulator
scnpilot_p_inoc_scaffold_1995_20
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20179..21750)
DNA (1572bp) protein (524aa)
Outer membrane autotransporter barrel domain-containing protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUW8_9BURK rbh
Outer membrane autotransporter barrel domain-containing protein {ECO:0000313|EMBL:EIK93008.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydr
outer membrane autotransporter barrel domain-containing protein
Displaying 20 items

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