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scnpilot_p_inoc_scaffold_156

Search features with annotation key words

Displaying items 211-240 of 314 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_156_211
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(237273..237941)
DNA (669bp) protein (223aa)
Regulatory protein TetR n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B0C8_DELSC
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:AEF88346.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4
scnpilot_p_inoc_scaffold_156_212
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

238097..238666
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ED87_BRASB
cupin Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
hypothetical protein
scnpilot_p_inoc_scaffold_156_213
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

238692..239645
DNA (954bp) protein (318aa)
Uncharacterized protein UPF0065 n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WS83_VEREI
hypothetical protein
Uncharacterized protein UPF0065 {ECO:0000313|EMBL:ABM60490.1}; Flags: Precursor;; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter
scnpilot_p_inoc_scaffold_156_214
Burkholderia oklahomensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

239654..240922
DNA (1269bp) protein (423aa)
fahA; fumarylacetoacetase (EC:3.7.1.2)
Fumarylacetoacetase {ECO:0000313|EMBL:AIO65954.1}; EC=3.7.1.2 {ECO:0000313|EMBL:AIO65954.1};; TaxID=342113 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Bur
fumarylacetoacetase n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A2FC4
scnpilot_p_inoc_scaffold_156_215
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(240959..244984)
DNA (4026bp) protein (1342aa)
Putative uncharacterized protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SXB7_ALCXX rbh
Uncharacterized protein {ECO:0000313|EMBL:EGP47454.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insu
hypothetical protein
scnpilot_p_inoc_scaffold_156_216
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(245059..246900)
DNA (1842bp) protein (614aa)
Surface antigen family protein n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FCN4_9BURK rbh
Surface antigen family protein {ECO:0000313|EMBL:EHK63989.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacte
surface antigen family protein
scnpilot_p_inoc_scaffold_156_217
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

247173..248609
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RW49_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFV95532.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis A
membrane protein
scnpilot_p_inoc_scaffold_156_218
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

248738..249061
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HG45_ACHXA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJO29481.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piec
scnpilot_p_inoc_scaffold_156_219
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(249074..250108)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TX30_9BRAD rbh
Esterase {ECO:0000313|EMBL:ETR77425.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
scnpilot_p_inoc_scaffold_156_220
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(250290..251270)
DNA (981bp) protein (327aa)
Putative exported protein n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XRP6_ALCXX rbh
ABC transporter substrate-binding protein
Putative exported protein {ECO:0000313|EMBL:AHC49469.1}; TaxID=1216976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xy
scnpilot_p_inoc_scaffold_156_221
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(251366..252418)
DNA (1053bp) protein (351aa)
3-methylitaconate isomerase {ECO:0000313|EMBL:CKI08736.1}; EC=5.3.3.6 {ECO:0000313|EMBL:CKI08736.1};; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae
UPI0003D65EB0 related cluster n=1 Tax=unknown RepID=UPI0003D65EB0 rbh
protein of unknown function DUF453
scnpilot_p_inoc_scaffold_156_222
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

252506..253414
DNA (909bp) protein (303aa)
LysR substrate binding domain protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XI29_9BURK rbh
LysR substrate binding domain protein {ECO:0000313|EMBL:EFF73441.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achro
LysR family transcriptional regulator YbhD
scnpilot_p_inoc_scaffold_156_223
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(253427..253753)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00037CBFBC
Thioredoxin {ECO:0000313|EMBL:KIF83151.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
thioredoxin domain protein
scnpilot_p_inoc_scaffold_156_224
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


253887..255950
DNA (2064bp) protein (688aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001329}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I7S9_BORPD
scnpilot_p_inoc_scaffold_156_225
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(255995..256249)
DNA (255bp) protein (85aa)
Type 1 capsular polysaccharide biosynthesis protein J n=1 Tax=Oceanibaculum indicum P24 RepID=K2JNQ0_9PROT
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ45508.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Me
type 1 capsular polysaccharide biosynthesis protein J
scnpilot_p_inoc_scaffold_156_226
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

256527..256718
DNA (192bp) protein (64aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T146_ALCXX
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000313|EMBL:EGP45947.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Ac
hypothetical protein
scnpilot_p_inoc_scaffold_156_227
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

256730..257611
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I1G5_BORPD rbh
hypothetical protein
Segregation and condensation protein A {ECO:0000256|SAAS:SAAS00093938}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Borde
scnpilot_p_inoc_scaffold_156_228
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

257679..258521
DNA (843bp) protein (281aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAA
Pantothenate synthetase n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5U8C5_ALCXX rbh
pantothenate synthetase
scnpilot_p_inoc_scaffold_156_229
unknown

Not on your lists

258629..258949
DNA (321bp) protein (107aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_156_230
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

258936..259238
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0UJ76_ALCFA
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1156918 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes fae
hypothetical protein
scnpilot_p_inoc_scaffold_156_231
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

259710..260531
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XA42_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EFF76307.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piech
hypothetical protein
scnpilot_p_inoc_scaffold_156_232
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

260601..261341
DNA (741bp) protein (247aa)
Putative exported protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I4M1_BORPD
PF04402 family protein {ECO:0000313|EMBL:KCB45878.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132
hypothetical protein
scnpilot_p_inoc_scaffold_156_233
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(261373..262155)
DNA (783bp) protein (261aa)
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=340100
Prolipoprotein diacylglyceryl transferase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I4M7_BORPD
scnpilot_p_inoc_scaffold_156_234
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

262361..262687
DNA (327bp) protein (109aa)
Cytochrome C n=1 Tax=Bordetella avium (strain 197N) RepID=Q2KVC3_BORA1
Putative cytochrome C-551 {ECO:0000313|EMBL:KCB37796.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8
cytochrome C
scnpilot_p_inoc_scaffold_156_235
unknown

Not on your lists

comp(262660..262752)
DNA (93bp) protein (31aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_156_236
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

262791..263336
DNA (546bp) protein (182aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=2 Tax=Bordetella bronchiseptica RepID=K4TD72_BORBO
methionine sulfoxide reductase
scnpilot_p_inoc_scaffold_156_237
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

263350..264345
DNA (996bp) protein (332aa)
Putative exported protein n=7 Tax=Bordetella RepID=K0N0V6_BORBM rbh
hypothetical protein
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:ETH90623.1}; TaxID=1331279 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;"
scnpilot_p_inoc_scaffold_156_238
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(264378..264680)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI000380DFCA
Histidine kinase {ECO:0000313|EMBL:KJV10000.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
two-component response regulator
scnpilot_p_inoc_scaffold_156_239
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

264946..265410
DNA (465bp) protein (155aa)
Bordetella petrii strain DSM 12804, complete genome n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HXZ7_BORPD
hypothetical protein
Bordetella petrii strain DSM 12804, complete genome {ECO:0000313|EMBL:CAP40638.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" so
scnpilot_p_inoc_scaffold_156_240
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

265423..266925
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HFF9_ACHXA rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP14115.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylos
Displaying items 211-240 of 314 in total

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