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scnpilot_p_inoc_scaffold_156

Search features with annotation key words

Displaying items 271-300 of 314 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_156_271
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

296308..297033
DNA (726bp) protein (242aa)
GntR family transcriptional regulator n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EDH7_9RHOB
GntR family transcriptional regulator {ECO:0000313|EMBL:ESW59121.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rho
GntR family transcriptional regulator
scnpilot_p_inoc_scaffold_156_272
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

297324..299237
DNA (1914bp) protein (638aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidi
Phosphomethylpyrimidine synthase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=THIC_BORPD rbh
thiC; thiamine biosynthesis protein ThiC
scnpilot_p_inoc_scaffold_156_273
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

299616..300401
DNA (786bp) protein (262aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenacea
Thiazole synthase n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F321_9BURK rbh
thiazole biosynthesis protein ThiG family protein
scnpilot_p_inoc_scaffold_156_274
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(300419..302107)
DNA (1689bp) protein (563aa)
Thiamine pyrophosphate protein TPP binding domain protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1FTY0_9BURK rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ45726.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni
scnpilot_p_inoc_scaffold_156_275
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(302116..303567)
DNA (1452bp) protein (484aa)
Betaine aldehyde dehydrogenase GbsA {ECO:0000313|EMBL:KFC61453.1}; EC=1.2.1.8 {ECO:0000313|EMBL:KFC61453.1};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxal
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A43EA rbh
aldehyde dehydrogenase
scnpilot_p_inoc_scaffold_156_276
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(303540..304754)
DNA (1215bp) protein (405aa)
L-lactate dehydrogenase (Cytochrome) {ECO:0000313|EMBL:EDT12997.1}; EC=1.1.2.3 {ECO:0000313|EMBL:EDT12997.1};; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burk
FMN-dependent family dehydrogenase n=1 Tax=Burkholderia sp. JPY347 RepID=UPI0003645811 rbh
FMN-dependent family dehydrogenase
scnpilot_p_inoc_scaffold_156_277
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(304774..306210)
DNA (1437bp) protein (479aa)
UbiD family decarboxylase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DGP9_9BURK rbh
UbiD family decarboxylase {ECO:0000313|EMBL:KFC61456.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.
UbiD family decarboxylase
scnpilot_p_inoc_scaffold_156_278
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(306243..307226)
DNA (984bp) protein (328aa)
MFS transporter rbh
MFS transporter {ECO:0000313|EMBL:AIJ45735.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;
HmfH' id=4402984 bin=GWA2_Polynucleobacter_45_21 species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
scnpilot_p_inoc_scaffold_156_279
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(307265..308422)
DNA (1158bp) protein (386aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ45732.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni
Mandelate racemase/muconate lactonizing protein id=4930050 bin=GWA2_Methylomirabilis_73_35 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
scnpilot_p_inoc_scaffold_156_280
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(308419..309411)
DNA (993bp) protein (331aa)
HmfH' id=4402988 bin=GWA2_Polynucleobacter_45_21 species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
hypothetical protein Tax=GWA2_Polynucleobacter_45_21_curated
MFS transporter
scnpilot_p_inoc_scaffold_156_281
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

309647..310597
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00035D574D rbh
Transcriptional regulator LysR family protein {ECO:0000313|EMBL:KFC61451.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source=
bacterial regulatory helix-turn-helix , lysR family protein
scnpilot_p_inoc_scaffold_156_282
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(310518..311411)
DNA (894bp) protein (298aa)
Uncharacterized protein n=7 Tax=Escherichia RepID=A1X5X8_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KHH04109.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.
hypothetical protein
scnpilot_p_inoc_scaffold_156_283
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(311404..312321)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0T2_NITHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE16405.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophil
scnpilot_p_inoc_scaffold_156_284
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(312520..313344)
DNA (825bp) protein (275aa)
Phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T104_ALCXX rbh
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EGP45985.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobact
scnpilot_p_inoc_scaffold_156_285
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

313461..313760
DNA (300bp) protein (100aa)
antibiotic biosynthesis monooxygenase n=1 Tax=Janthinobacterium lividum RepID=UPI000288957B
Uncharacterized protein {ECO:0000313|EMBL:CCE07209.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
antibiotic biosynthesis monooxygenase
scnpilot_p_inoc_scaffold_156_286
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

313810..314490
DNA (681bp) protein (227aa)
pcm1; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I139_BORPD rbh
Uncharacterized protein {ECO:0000313|EMBL:CAP40821.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (str
scnpilot_p_inoc_scaffold_156_287
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

314507..315820
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000313B797 rbh
Channel protein TolC {ECO:0000313|EMBL:KIF81783.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp.
type I secretion outer membrane efflux TolC protein
scnpilot_p_inoc_scaffold_156_288
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(315817..316824)
DNA (1008bp) protein (336aa)
amidohydrolase 2; K10220 4-oxalmesaconate hydratase [EC:4.2.1.83] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000318BD20 rbh
ligJ; putative 4-oxalomesaconate hydratase
scnpilot_p_inoc_scaffold_156_289
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(316821..317723)
DNA (903bp) protein (301aa)
Putative TIM-barrel fold metal-dependent hydrolase n=1 Tax=Rhizobium sp. CF080 RepID=J2K844_9RHIZ rbh
amidohydrolase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
amidohydrolase family protein
scnpilot_p_inoc_scaffold_156_290
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(317767..318747)
DNA (981bp) protein (327aa)
TctC n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KVG8_9BURK rbh
TctC {ECO:0000313|EMBL:EGI76206.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
hypothetical protein
scnpilot_p_inoc_scaffold_156_291
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

319022..320011
DNA (990bp) protein (330aa)
TctC n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTZ7_9BURK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
TctC
scnpilot_p_inoc_scaffold_156_292
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

320023..320730
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DLJ2_BRAJP
ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase {ECO:0000313|EMBL:AIQ92964.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriacea
scnpilot_p_inoc_scaffold_156_293
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

320771..321757
DNA (987bp) protein (329aa)
4,5-dihydroxyphthalate decarboxylase (EC:4.1.1.55); K04102 4,5-dihydroxyphthalate decarboxylase [EC:4.1.1.55] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=1 Tax=Rhizobium sp. CF080 RepID=J3CQV8_9RHIZ rbh
ABC transporter, phosphonate, periplasmic substrate-binding family protein
scnpilot_p_inoc_scaffold_156_294
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

321805..322659
DNA (855bp) protein (285aa)
Putative TIM-barrel fold metal-dependent hydrolase n=1 Tax=Rhizobium sp. CF080 RepID=J2K844_9RHIZ
amidohydrolase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
amidohydrolase
scnpilot_p_inoc_scaffold_156_295
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

322665..323543
DNA (879bp) protein (293aa)
Putative uncharacterized protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KVH2_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EGI76210.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis
hypothetical protein
scnpilot_p_inoc_scaffold_156_296
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(323524..324045)
DNA (522bp) protein (174aa)
Cupin region n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IVF3_RHOP2
cupin region
Cupin region {ECO:0000313|EMBL:ABD07807.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris
scnpilot_p_inoc_scaffold_156_297
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(324042..324791)
DNA (750bp) protein (250aa)
Hydrolase, alpha n=1 Tax=Oceanibaculum indicum P24 RepID=K2K0M0_9PROT
Hydrolase, alpha {ECO:0000313|EMBL:EKE76294.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicu
bioH; hydrolase, alpha
scnpilot_p_inoc_scaffold_156_298
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(324813..325778)
DNA (966bp) protein (322aa)
Candidate extracytoplasmic binding receptor n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XY33_RAMTT
tctC; extracytoplasmic binding receptor
Candidate extracytoplasmic binding receptor {ECO:0000313|EMBL:AEG94358.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="R
scnpilot_p_inoc_scaffold_156_299
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

325894..326850
DNA (957bp) protein (319aa)
Transcriptional regulator, LysR family n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UFX9_METS4
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACA18233.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source=
scnpilot_p_inoc_scaffold_156_300
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

326968..327903
DNA (936bp) protein (312aa)
Transcriptional regulator, LysR family n=3 Tax=Burkholderia multivorans RepID=B9BJK8_9BURK rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ETY78471.1}; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bu
bacterial regulatory helix-turn-helix , lysR family protein rbh
Displaying items 271-300 of 314 in total

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