ggKbase home page

scnpilot_p_inoc_scaffold_156_281

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 309647..310597

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00035D574D similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 315.0
  • Bit_score: 421
  • Evalue 7.30e-115
  • rbh
Transcriptional regulator LysR family protein {ECO:0000313|EMBL:KFC61451.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 62.3
  • Coverage: 310.0
  • Bit_score: 385
  • Evalue 8.10e-104
bacterial regulatory helix-turn-helix , lysR family protein similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 311.0
  • Bit_score: 342
  • Evalue 1.60e-91

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Massilia sp. LC238 → Massilia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 951
ATGGAATTCCGGCAAATCCAATACTTCATCTGCCTGTTCGAGGAAGGCACCGTCACGAAGGCCGCGCGCCGGCTGAACATCGTCCAGCCCGCGCTCAGCATGCAGATCTCCAAGCTCGAACAGGAAGTCGGGCAGCGGCTGTTCGAACGCAGCCCCCAGGGCATGCTGCCCACCGCCACGGCGCGGCACATGTACCGGCTGTTCCTGCCCATCATGCGCGACTTCTCGCAGGCCCGCGACGAAGTCCTGTGCAACGACGGAGAAATCGCCGGCCACGTCAACATCGGCCTGATCGCCTCCATCACCGAAGGCGTGCTGGCCGAGACCATGACCAAGTTCTCGGCCAGCCATCCCAAGGTCTCGGTCACCGTGGCCGATGGCTACAGCGCCACGCTCAGCGACTGGGTGGCCGGCGGGCAGCTCGACGCCGCCATCATCAACAAGCCGCGCCGGCCGCTGGCGCTGAGCGTGGACCACATCGTGGACGAGGAACTGGTGCTGATCACCGGCACGCGGCACGCGGGCAACCTGCCCGCGCGGCTCACGCTGGGCCAGATCGCCTCGCAGAACCTGTCGCTGGTGCTGACCACGCGGCGCCACGGCCTGCGCCACATCATCGACAGCTTCGCCCAGCACGACAACGTCGAACTGGCCCCCTCGCTGGAAGTCGACTCCCTGGTCACCGTGGTCAAGCTGGTCGAGCAGAATCAACTGGCGACGATCCTGCCGCGCATCGCCGTGCACGACCGGCTGCGGGCCGGCATCCTGCAGGCGCACGCCATCGTCTCGCCCCGGTTGATACGGCAGGTGGTGTCGGTGGTCCATCCGCGCCGGCCGCTGAATCCGGCGGCGGCAGCCTTCATGGCCATGCTTACCCGGCAGATCCGGCTGCGGGCGCAGGAACAGGCGCCCGGGGCGCAGGCCACGGCAACGCCTCATAGAACACTCTGA
PROTEIN sequence
Length: 317
MEFRQIQYFICLFEEGTVTKAARRLNIVQPALSMQISKLEQEVGQRLFERSPQGMLPTATARHMYRLFLPIMRDFSQARDEVLCNDGEIAGHVNIGLIASITEGVLAETMTKFSASHPKVSVTVADGYSATLSDWVAGGQLDAAIINKPRRPLALSVDHIVDEELVLITGTRHAGNLPARLTLGQIASQNLSLVLTTRRHGLRHIIDSFAQHDNVELAPSLEVDSLVTVVKLVEQNQLATILPRIAVHDRLRAGILQAHAIVSPRLIRQVVSVVHPRRPLNPAAAAFMAMLTRQIRLRAQEQAPGAQATATPHRTL*