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scnpilot_p_inoc_scaffold_156_287

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 314507..315820

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000313B797 similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 434.0
  • Bit_score: 441
  • Evalue 9.40e-121
  • rbh
Channel protein TolC {ECO:0000313|EMBL:KIF81783.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 436.0
  • Bit_score: 440
  • Evalue 2.90e-120
type I secretion outer membrane efflux TolC protein similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 429.0
  • Bit_score: 434
  • Evalue 4.30e-119

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Taxonomy

Herbaspirillum sp. TSA66 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1314
ATGCGCGCCAGGCCGTACTACGTCCAGACGCTATGCGCGCTGTTCGGCGCCTGCGCTTTCGTTCCTGCGGTCGCGGCACTGGACCTGGAGCAGGCCTACCAGTCGGCGCTGGCCAACGATGCGACCTTCGCGTCGGTGCGCTCGGCCTATACCGCCACGCTTGAAAAACTGCCCCAGGCGCGTGCCTCGCTGCTGCCCGCCATCTCGCTCGCCGGCAGCCGCGGCGAGGCCTCCACGACCCGCCTGCCGGGCGTGACCTACACGAACGAAACCTATACGCTGCAACTGATCCAGCCGCTGTTCCGCTGGTCGGGCTGGCAGACCTACGAACAGTCCAAGCTGCAGGTGGCCGTCGGCGAAACCCAGCTCGCCCAGGGGCGCCAGGACCTGATCCTGCGGGTGGCGCAGGCCTATTTCGACGTGCTGGCGGCGCAGGACAACCTGGCCTTCATCGGCGCCCAGAAAATCGCCATCTCGGAACAGCTCGAATCGGCCAAGCGCAATTTCGAGATCGGCACGGCCACCATCACCGACACCTACGAGGCCCAGGCGCGCTACGACCTGGCCCAGGCCCAGGAGATCCAGGCCGAGTCCGACCTGGCGGTCCGCATCGGCGCGCTGCAGCAGATCATCGGCGCGCCCTCGGGCGACCTGGCCAAGCTACCGCCCACCGTCAACGTGCCCGCGCCGCAGCCGGCCCGGATCGACGCCTGGACCGAACAGGCCACGGCCAACAACCTGGCGGTCGCCCAGGCCACCCTCAATAGCGAGATCGCCAAGCGCGGCATAGAAATCGCCAAGAGCGGGCACTACCCCGCGGTCGATCTGGCCGCCAACGTGGCGCGCACGCGCGGCCTGGTCGGGCAGACCGTGGTCAACGATTTCTACACCACGCGCTCGGTGGGCGTGCAGGTCTCGGTGCCCATCTTCGCCGGCTTCGGCACCACGTCCAAGGTGGACGAGGCCGTCGCGCTGTCCGAGAAGGCCCGCAACGACCTGGAGGTCGCCCGCCGGGCCGCGATCCAGAACACGCGCGTCGCGTTCCAGGGCGTGAACGCCGGGCTGGCCCAGGTCCGCGCGCTGGAGGCGGCGCAAGTCTCCAGCCGCAGCGCGCTGGATGCCAACAAGACCGGCTATGAAGTGGGCGTGCGCATCAACATCGATGTGCTGAACGCCCAGCAGCAGCTCTATTCGACCGAACGCGACCTGGCCAAGGCGCGCTACGACGCGCTGCTGTCGGGCCTGCGGCTGAAGGCCGCGTCCGGCATCCTGTCGGAAGACGACGTCCGGCAGGTCAACGGGCTGCTGCGCTAG
PROTEIN sequence
Length: 438
MRARPYYVQTLCALFGACAFVPAVAALDLEQAYQSALANDATFASVRSAYTATLEKLPQARASLLPAISLAGSRGEASTTRLPGVTYTNETYTLQLIQPLFRWSGWQTYEQSKLQVAVGETQLAQGRQDLILRVAQAYFDVLAAQDNLAFIGAQKIAISEQLESAKRNFEIGTATITDTYEAQARYDLAQAQEIQAESDLAVRIGALQQIIGAPSGDLAKLPPTVNVPAPQPARIDAWTEQATANNLAVAQATLNSEIAKRGIEIAKSGHYPAVDLAANVARTRGLVGQTVVNDFYTTRSVGVQVSVPIFAGFGTTSKVDEAVALSEKARNDLEVARRAAIQNTRVAFQGVNAGLAQVRALEAAQVSSRSALDANKTGYEVGVRINIDVLNAQQQLYSTERDLAKARYDALLSGLRLKAASGILSEDDVRQVNGLLR*