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scnpilot_p_inoc_scaffold_407_185

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(191582..192118)

Top 3 Functional Annotations

Value Algorithm Source
Lipid A deacylase {ECO:0000256|PIRNR:PIRNR029681}; EC=3.1.1.77 {ECO:0000256|PIRNR:PIRNR029681};; LPS 3-O-deacylase {ECO:0000256|PIRNR:PIRNR029681}; Outer membrane enzyme {ECO:0000256|PIRNR:PIRNR029681 similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 185.0
  • Bit_score: 188
  • Evalue 8.20e-45
Lipid A deacylase n=2 Tax=Bordetella holmesii RepID=M5NXN8_9BORD similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 185.0
  • Bit_score: 188
  • Evalue 5.90e-45
lipid A 3-O-deacylase family protein similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 185.0
  • Bit_score: 188
  • Evalue 1.70e-45

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Taxonomy

Bordetella holmesii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGAACAAAACCGCCCTAGTCGCCGCGCTTCTCGCCCTTGCTTCCTTTTCGGCCCACGGGGCCGATCCCAGCGGTGGCTTCGCCAACGGTGGCTGGAGCGCCCAGTACGGGGTAGGCGGCGGCAACCACCGCGTCACGCTCAACTACGAAACCTCGCCGCTCTGGCACATGAAGCTCGGCTCGACCCGCCTGGAACTCGTGGGCGAACTGGGCGGCTCGTACTGGTGGACCTCGAACGCGCTGCCGGGCTTCGCCCGCCACATGTGGCAGCTCAACGCCGTCCCCATGTTCCGCTGGTGGCCCACCGAGCGCTTCTACGTCGAAGGCGGCATCGGCGCCACGGCCGTCAGCGAGACCAAGTTCCACGACAAGAACATCAGCTCCACCTTCCAGTTCGGCGACCACATCGGCGCCGGCTTCAAGCTGGCCGAGAACATGCGCCTGGGCCTGCGCGTGTCGCACTTCTCCAACGGCGGCATGAAGAAGCCCAACCAGGGCCTGAACCAGGTCCAGCTGAACTTCGCCATGGGGTTTTGA
PROTEIN sequence
Length: 179
MNKTALVAALLALASFSAHGADPSGGFANGGWSAQYGVGGGNHRVTLNYETSPLWHMKLGSTRLELVGELGGSYWWTSNALPGFARHMWQLNAVPMFRWWPTERFYVEGGIGATAVSETKFHDKNISSTFQFGDHIGAGFKLAENMRLGLRVSHFSNGGMKKPNQGLNQVQLNFAMGF*