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scnpilot_p_inoc_scaffold_407

Search features with annotation key words

Displaying items 181-210 of 282 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_407_181
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(187209..188105)
DNA (897bp) protein (299aa)
Diguanylate cyclase domain protein / diguanylate phosphodiesterase domain protein n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WWH9_9BURK
Diguanylate cyclase domain protein / diguanylate phosphodiesterase domain protein {ECO:0000313|EMBL:EON11607.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; B
hypothetical protein
scnpilot_p_inoc_scaffold_407_182
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

188860..189351
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S6Q3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EHP41714.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basile
hypothetical protein
scnpilot_p_inoc_scaffold_407_183
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

189348..190121
DNA (774bp) protein (258aa)
Cellulose synthase operon protein YhjQ n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GNH1_CUPNN rbh
Chromosome partitioning protein ParA {ECO:0000313|EMBL:KJK25277.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae b
Cellulose synthase, putative
scnpilot_p_inoc_scaffold_407_184
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

190164..191306
DNA (1143bp) protein (381aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_012
Cyclic pyranopterin monophosphate synthase n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=G0ERA1_CUPNN rbh
moaA; molybdenum cofactor biosynthesis protein MoaA
scnpilot_p_inoc_scaffold_407_185
Bordetella holmesii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(191582..192118)
DNA (537bp) protein (179aa)
Lipid A deacylase {ECO:0000256|PIRNR:PIRNR029681}; EC=3.1.1.77 {ECO:0000256|PIRNR:PIRNR029681};; LPS 3-O-deacylase {ECO:0000256|PIRNR:PIRNR029681}; Outer membrane enzyme {ECO:0000256|PIRNR:PIRNR029681
Lipid A deacylase n=2 Tax=Bordetella holmesii RepID=M5NXN8_9BORD
lipid A 3-O-deacylase family protein
scnpilot_p_inoc_scaffold_407_186
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(192297..193166)
DNA (870bp) protein (290aa)
acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (EC:6.4.1.2)
acetyl-CoA carboxylase carboxyl transferase subunit beta n=1 Tax=Burkholderia sp. JPY347 RepID=UPI00036F1C40 rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltr
scnpilot_p_inoc_scaffold_407_187
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(193163..194038)
DNA (876bp) protein (292aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=1216976 species="
Tryptophan synthase alpha chain n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4XRJ5_ALCXX rbh
Tryptophan synthase alpha chain
scnpilot_p_inoc_scaffold_407_188
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(194050..195249)
DNA (1200bp) protein (400aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
UPI0002F71C5A related cluster n=1 Tax=unknown RepID=UPI0002F71C5A rbh
Tryptophan synthase beta chain
scnpilot_p_inoc_scaffold_407_189
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(195320..195961)
DNA (642bp) protein (214aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_0013
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Bordetella bronchiseptica (strain MO149) RepID=K0MJV8_BORBM
trpF; N-(5'-phosphoribosyl)anthranilate isomerase
scnpilot_p_inoc_scaffold_407_190
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

196165..198024
DNA (1860bp) protein (620aa)
feruloyl esterase (EC:3.1.1.73)
Feruloyl esterase n=2 Tax=Burkholderia cenocepacia RepID=A0KDJ6_BURCH rbh
Feruloyl esterase {ECO:0000313|EMBL:KGY55747.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" sourc
scnpilot_p_inoc_scaffold_407_191
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(198049..198840)
DNA (792bp) protein (264aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
truA; tRNA pseudouridine synthase A (EC:4.2.1.70)
tRNA pseudouridine synthase A n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=TRUA_BORPD rbh
scnpilot_p_inoc_scaffold_407_192
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(198852..200726)
DNA (1875bp) protein (625aa)
hypothetical protein n=1 Tax=Janthinobacterium lividum RepID=UPI0002897B5C
Uncharacterized protein {ECO:0000313|EMBL:KHA78303.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacter
type 4 pilus biogenesis
scnpilot_p_inoc_scaffold_407_193
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(200865..201992)
DNA (1128bp) protein (376aa)
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IRL6_BORPD rbh
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:M
scnpilot_p_inoc_scaffold_407_194
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(202074..203147)
DNA (1074bp) protein (358aa)
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|H
3-isopropylmalate dehydrogenase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00031C0275 rbh
scnpilot_p_inoc_scaffold_407_195
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(203204..203872)
DNA (669bp) protein (223aa)
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031, ECO:0000313|EMBL:CAQ70056.1};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:
3-isopropylmalate dehydratase small subunit n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R122_CUPTR rbh
scnpilot_p_inoc_scaffold_407_196
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(203884..205287)
DNA (1404bp) protein (468aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i
3-isopropylmalate dehydratase large subunit n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GU42_PUSST
3-isopropylmalate dehydratase large subunit
scnpilot_p_inoc_scaffold_407_197
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(205592..206428)
DNA (837bp) protein (279aa)
Peptidase, M48 family {ECO:0000313|EMBL:EFF76058.1}; EC=3.4.24.- {ECO:0000313|EMBL:EFF76058.1};; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Ac
peptidase family M48 (EC:3.4.24.-)
Peptidase, M48 family n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XAX9_9BURK rbh
scnpilot_p_inoc_scaffold_407_198
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(206490..207590)
DNA (1101bp) protein (367aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
Chorismate synthase n=1 Tax=Ralstonia sp. PBA RepID=I9W5E0_9RALS rbh
aroC; chorismate synthase (5-enolpyruvylshikimate-3-phosphatephospholyase) protein
scnpilot_p_inoc_scaffold_407_199
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(207897..208361)
DNA (465bp) protein (155aa)
Inosine-5'-monophosphate dehydrogenase n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4XT65_ALCXX
CBS
CBS {ECO:0000313|EMBL:AIR50963.1}; Uncharacterized protein {ECO:0000313|EMBL:EFV83833.1}; TaxID=562971 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromoba
scnpilot_p_inoc_scaffold_407_200
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(208471..209190)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000308CD35
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CAP43767.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordete
scnpilot_p_inoc_scaffold_407_201
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

209306..210841
DNA (1536bp) protein (512aa)
Putative esterase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HVC0_AZOC5
esterase
Putative esterase {ECO:0000313|EMBL:BAF90297.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (
scnpilot_p_inoc_scaffold_407_202
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

210935..212092
DNA (1158bp) protein (386aa)
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TGG3_TISMK
amidohydrolase; K07045 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
scnpilot_p_inoc_scaffold_407_203
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

212183..213166
DNA (984bp) protein (328aa)
MFS transporter n=1 Tax=Variovorax paradoxus RepID=UPI0003644E12
extra-cytoplasmic solute receptor family protein 101 Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
extra-cytoplasmic solute receptor family protein 101
scnpilot_p_inoc_scaffold_407_204
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

213186..214178
DNA (993bp) protein (331aa)
4,5-dihydroxyphthalate decarboxylase (EC:4.1.1.55)
4,5-dihydroxyphthalate decarboxylase {ECO:0000313|EMBL:CCN21177.1}; EC=4.1.1.55 {ECO:0000313|EMBL:CCN21177.1};; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Al
4,5-dihydroxyphthalate decarboxylase n=3 Tax=Bordetella bronchiseptica RepID=K4QMK6_BORBO
scnpilot_p_inoc_scaffold_407_205
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

214175..215038
DNA (864bp) protein (288aa)
Putative esterase n=4 Tax=Bordetella RepID=K0MK72_BORPB
esterase
Putative esterase {ECO:0000313|EMBL:CCJ51357.1}; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapertussis (s
scnpilot_p_inoc_scaffold_407_206
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

215056..216219
DNA (1164bp) protein (388aa)
ABC transporter substrate binding protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SG97_9BURK
ABC transporter substrate binding protein {ECO:0000313|EMBL:EHP38435.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="
extracellular ligand-binding receptor
scnpilot_p_inoc_scaffold_407_207
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

216234..217115
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002FCB073 rbh
putative transmembrane abc transporter protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
inner-membrane translocator
scnpilot_p_inoc_scaffold_407_208
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

217112..218098
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002D8D87F
ABC transporter permease {ECO:0000313|EMBL:KJK21931.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.
Branched-chain amino acid transport system permease protein LivM
scnpilot_p_inoc_scaffold_407_209
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

218095..218853
DNA (759bp) protein (253aa)
Amino-acid ATP-binding ABC transporter protein n=1 Tax=Ralstonia solanacearum (strain Po82) RepID=F6FZX2_RALS8
amino-acid ATP-binding ABC transporter protein
Amino-acid ATP-binding ABC transporter protein {ECO:0000313|EMBL:AEG68484.1}; TaxID=1031711 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" sourc
scnpilot_p_inoc_scaffold_407_210
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

218844..219596
DNA (753bp) protein (251aa)
ABC transporter related protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KQM9_9BURK
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EYC49712.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemone
ABC transporter
Displaying items 181-210 of 282 in total

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