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scnpilot_p_inoc_scaffold_407_191

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(198049..198840)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 257.0
  • Bit_score: 367
  • Evalue 1.90e-98
truA; tRNA pseudouridine synthase A (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 261.0
  • Bit_score: 366
  • Evalue 5.00e-99
tRNA pseudouridine synthase A n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=TRUA_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 261.0
  • Bit_score: 366
  • Evalue 1.80e-98
  • rbh

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Taxonomy

Bordetella bronchiseptica → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGGCGCGCATCGCCTTGGGGCTGAGCTACGACGGCGCTCCCTGGCTGGGCTGGCAGACCCAGCCGCACCGGCGAACCGTGCAGGACCGGCTGGAGTCGGCCCTGGCCGCCTTCGTCGGCCAGCCGGTGGCCACCATCTGTGCCGGCCGCACCGACACCGGGGTCCATGCCGCGCAGCAGATCGTGCACCTGGACACCGAGGTATTGCGTCCCGAACAGGCCTGGGTGCGTGGCGTGAACGCGCACCTGCCGCCCAGCATCGCGGTGCGCTGGGCGCGCGAGGTGCCCGCCGACTTCCACGCCCGTTTCTCGGCGCGTTCGCGTTCCTACGTCTACCTGCTGCTGGACGACCCCGTGCGCTCGCCGCTGTGGACCGGTCGCGCGGGCTGGAGCTTCCGGCCCCTGGACCTGGAAGCGATGCGGGCGGGGGCGGCCCATCTGCTGGGCGAGCACGACTTCAGCAGCTTCCGTTCGTCCGAGTGCCAGGCGGCCTCGCCCGTGCGCACGATGCACGAACTCGGCATCGAACGGCGCGGCCGGCTGGTGGTTTTCACCCTGCGCGCCAACGCTTTCCTGCACCACATGGTCCGCAACATCGTGGGAGCGCTGGTGTACGTGGGGCAGGGCAGGCAGCCCGCCGGCTGGATGCCCGCGCTGCTGGCCGAGCGCAACCGGACCAAGGCCGCGCCCACGTTCTCGCCCCACGGCCTCTACCTGACGGCCGTGGGTTATCCCGGCGACTACGGCCTGCCGTCCACCGACGCGACCGACGAAATCCGGCTGGGGCGCTGA
PROTEIN sequence
Length: 264
MARIALGLSYDGAPWLGWQTQPHRRTVQDRLESALAAFVGQPVATICAGRTDTGVHAAQQIVHLDTEVLRPEQAWVRGVNAHLPPSIAVRWAREVPADFHARFSARSRSYVYLLLDDPVRSPLWTGRAGWSFRPLDLEAMRAGAAHLLGEHDFSSFRSSECQAASPVRTMHELGIERRGRLVVFTLRANAFLHHMVRNIVGALVYVGQGRQPAGWMPALLAERNRTKAAPTFSPHGLYLTAVGYPGDYGLPSTDATDEIRLGR*