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scnpilot_p_inoc_scaffold_407_195

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(203204..203872)

Top 3 Functional Annotations

Value Algorithm Source
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 211.0
  • Bit_score: 354
  • Evalue 1.70e-95
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031, ECO:0000313|EMBL:CAQ70056.1};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule: similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 211.0
  • Bit_score: 354
  • Evalue 8.30e-95
3-isopropylmalate dehydratase small subunit n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R122_CUPTR similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 211.0
  • Bit_score: 354
  • Evalue 5.90e-95
  • rbh

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Taxonomy

Cupriavidus taiwanensis → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGCAAGCATTCACCACTCATGAAGGCCTGGTGGCGCCGCTGGACCGCGAGAACGTCGACACGGACCAGATCATTCCCAAGCAATTCCTGAAGTCCATCCATCGCAGCGGCTTCGGCCCCAACCTGTTCGACGCCTGGCGCTACCTGGATGAAGGCCAGCCCGGCATGGACAACAGCAAGCGGCCGCTGAATCCGGACTTCGTGCTGAACCAGCCGCGCTACCAGGGCGCTTCCGTCCTGCTGGCGCGCAAGAACTTCGGCTGCGGCTCGAGCCGCGAGCACGCGCCGTGGGCGCTGGACCAGTACGGTTTCCGCGCGGTGATCGCGCCGTCGTTCGCCGACATCTTCTTCAACAACTGCTTCAAGAACGGCGTGCTGCCCATCGTGCTGTCGGAAGGCGACGTGGACAGTCTGTTCCAGGAAGTGGAAGGCAAGGAAGGCTACCGGCTGACCATCGACCTGGATCGCCAGGTCGTCGTGACGCCGTCCGGCCGCGAGCTGTCGTTCAGCGTCGACAGCTTCCGCAAGTACTGCATGCTGAACGGCCTGGACGAGATCGGCCTGACGCTGCGTCATGCGGACAAGATCAAGGCCTTCGAGCAGAAGCGGCTTGCGACCCAACCCTGGCTGGATGTTCCTGAGCTGCGCGGCAGCCAGGCCGGCCGCTGA
PROTEIN sequence
Length: 223
MQAFTTHEGLVAPLDRENVDTDQIIPKQFLKSIHRSGFGPNLFDAWRYLDEGQPGMDNSKRPLNPDFVLNQPRYQGASVLLARKNFGCGSSREHAPWALDQYGFRAVIAPSFADIFFNNCFKNGVLPIVLSEGDVDSLFQEVEGKEGYRLTIDLDRQVVVTPSGRELSFSVDSFRKYCMLNGLDEIGLTLRHADKIKAFEQKRLATQPWLDVPELRGSQAGR*