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scnpilot_p_inoc_scaffold_407

Search features with annotation key words

Displaying items 211-240 of 282 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_407_211
unknown

Not on your lists

219631..219936
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003087BC3
scnpilot_p_inoc_scaffold_407_212
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

219950..220798
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00031FBBB7 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ87560.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum
scnpilot_p_inoc_scaffold_407_213
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(220839..222290)
DNA (1452bp) protein (484aa)
UPF0761 membrane protein Bpet3042 n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=Y3042_BORPD rbh
ribonuclease
UPF0761 membrane protein Bpet3042 {ECO:0000255|HAMAP-Rule:MF_00672}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetel
scnpilot_p_inoc_scaffold_407_214
Burkholderia rhizoxinica, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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222312..222923
DNA (612bp) protein (204aa)
wrbA; NAD(P)H:quinone oxidoreductase, type IV (EC:1.6.5.2)
NAD(P)H dehydrogenase (quinone) {ECO:0000256|SAAS:SAAS00064138}; EC=1.6.5.2 {ECO:0000256|SAAS:SAAS00064138};; TaxID=882378 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkh
NAD(P)H quinone oxidoreductase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000371AC9E
scnpilot_p_inoc_scaffold_407_215
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

222920..223324
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XT28_ALCXX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH07776.1}; TaxID=1167634 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylo
scnpilot_p_inoc_scaffold_407_216
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

223350..224750
DNA (1401bp) protein (467aa)
D-2-hydroxyglutarate dehydrogenase n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XUT3_ALCXX
D-2-hydroxyglutarate dehydrogenase
D-2-hydroxyglutarate dehydrogenase {ECO:0000313|EMBL:CCH06922.1}; TaxID=1167634 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromo
scnpilot_p_inoc_scaffold_407_217
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(224764..225663)
DNA (900bp) protein (300aa)
LysR substrate binding domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZZ02_9PROT rbh
LysR substrate binding domain protein {ECO:0000313|EMBL:EHM01720.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobactera
transcriptional regulator
scnpilot_p_inoc_scaffold_407_218
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

225772..226632
DNA (861bp) protein (287aa)
Alpha-ketoglutarate-dependent taurine dioxygenase (EC:1.14.11.17)
Taurine catabolism dioxygenase n=1 Tax=Pseudomonas aeruginosa BWHPSA020 RepID=U8S670_PSEAI
Taurine dioxygenase {ECO:0000313|EMBL:AKE69872.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
scnpilot_p_inoc_scaffold_407_219
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

226616..227404
DNA (789bp) protein (263aa)
Uncharacterized protein n=2 Tax=Desulfovibrio africanus RepID=F3Z1U8_DESAF id=5225489 bin=16ft_combo_ws3_JS1 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein; K07081 Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
mqnA; futalosine synthase
scnpilot_p_inoc_scaffold_407_220
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

227448..228455
DNA (1008bp) protein (336aa)
extracytoplasmic binding receptor n=1 Tax=Variovorax paradoxus RepID=UPI000365A8C0
Uncharacterized protein {ECO:0000313|EMBL:KGJ23217.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 550
ABC transporter substrate-binding protein
scnpilot_p_inoc_scaffold_407_221
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(228487..228864)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Achromobacter piechaudii HLE RepID=J4QX29_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGD94183.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp.
hypothetical protein
scnpilot_p_inoc_scaffold_407_222
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

228987..229952
DNA (966bp) protein (322aa)
tRNA-dihydrouridine synthase n=35 Tax=Bordetella RepID=F4LFP0_BORPC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAE41383.1}; TaxID=257313 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis (
scnpilot_p_inoc_scaffold_407_223
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

230069..230707
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PUM7_9RHOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL26301.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
scnpilot_p_inoc_scaffold_407_224
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

230769..231635
DNA (867bp) protein (289aa)
Short-chain dehydrogenase family protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PSM7_9RHOO rbh
short-chain dehydrogenase family protein
Short-chain dehydrogenase family protein {ECO:0000313|EMBL:BAL24969.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus
scnpilot_p_inoc_scaffold_407_225
unknown

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comp(231625..231945)
DNA (321bp) protein (107aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_407_226
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

232145..232822
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SCM8_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM93317.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM
scnpilot_p_inoc_scaffold_407_227
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(232819..234048)
DNA (1230bp) protein (410aa)
Uncharacterized conserved protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SUD0_JANMA rbh
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:ABR90280.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Jan
scnpilot_p_inoc_scaffold_407_228
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

234211..235299
DNA (1089bp) protein (363aa)
Gram-negative porin n=2 Tax=Ralstonia RepID=E2SUA5_9RALS rbh
Membrane protein {ECO:0000313|EMBL:KHL06235.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
membrane protein
scnpilot_p_inoc_scaffold_407_229
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

235441..235926
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI00036424B7
MarR family transcriptional regulator {ECO:0000313|EMBL:KDB53325.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans s
MarR family transcriptional regulator
scnpilot_p_inoc_scaffold_407_230
Enterobacter cancerogenus, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(235936..236910)
DNA (975bp) protein (325aa)
Membrane protein, putative n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SBR9_METPP
membrane protein
Membrane protein {ECO:0000313|EMBL:KGT93774.1}; TaxID=69218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;"
scnpilot_p_inoc_scaffold_407_231
Pseudomonas sp. HPB0071, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(236885..238156)
DNA (1272bp) protein (424aa)
Cardiolipin synthase B {ECO:0000256|HAMAP-Rule:MF_01917}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01917};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01917};; TaxID=1203578 species="Bacteria; Proteoba
cardiolipin synthase 2 (EC:2.7.8.-)
Uncharacterized protein n=1 Tax=Pseudomonas sp. HPB0071 RepID=N2ISW6_9PSED rbh
scnpilot_p_inoc_scaffold_407_232
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(238153..238941)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SBS1_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM93010.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM
scnpilot_p_inoc_scaffold_407_233
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(238974..240503)
DNA (1530bp) protein (510aa)
zwf; glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0
Glucose-6-phosphate 1-dehydrogenase n=2 Tax=Methylobacterium extorquens RepID=C5B1S0_METEA rbh
scnpilot_p_inoc_scaffold_407_234
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(240588..241526)
DNA (939bp) protein (313aa)
Transcriptional regulator, LysR family n=1 Tax=Pseudomonas putida (strain F1 / ATCC 700007) RepID=A5W064_PSEP1 rbh
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABQ77524.1}; TaxID=351746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
scnpilot_p_inoc_scaffold_407_235
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

241703..242671
DNA (969bp) protein (323aa)
TctC n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTZ7_9BURK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ABC transporter substrate-binding protein
scnpilot_p_inoc_scaffold_407_236
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

242850..243551
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Y5A3_9RHIZ
ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase {ECO:0000313|EMBL:AIQ92964.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriacea
scnpilot_p_inoc_scaffold_407_237
Burkholderia sp. CCGE1003, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

243632..244507
DNA (876bp) protein (292aa)
Amidohydrolase 2 n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1TEF0_BURSG rbh
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:ADN61279.1}; TaxID=640512 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain
scnpilot_p_inoc_scaffold_407_238
Ralstonia syzygii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(244629..245822)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Ralstonia syzygii R24 RepID=G3A004_9RALS rbh
conserved membrane protein of unknown function, DUF989
Uncharacterized protein {ECO:0000313|EMBL:CCA84482.1}; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia syzygii R24
scnpilot_p_inoc_scaffold_407_239
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

246063..246668
DNA (606bp) protein (202aa)
Large tegument domain-containing protein n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FAY9_9BURK
Large tegument domain-containing protein {ECO:0000313|EMBL:EHK64552.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Ac
putative lipoprotein
scnpilot_p_inoc_scaffold_407_240
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

246738..248219
DNA (1482bp) protein (494aa)
Succinic semialdehyde dehydrogenase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXC8_PUSST rbh
succinate-semialdehyde dehydrogenase
Succinic semialdehyde dehydrogenase {ECO:0000313|EMBL:AEC18993.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusilli
Displaying items 211-240 of 282 in total

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