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scnpilot_p_inoc_scaffold_407_220

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 227448..228455

Top 3 Functional Annotations

Value Algorithm Source
extracytoplasmic binding receptor n=1 Tax=Variovorax paradoxus RepID=UPI000365A8C0 similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 334.0
  • Bit_score: 293
  • Evalue 3.20e-76
Uncharacterized protein {ECO:0000313|EMBL:KGJ23217.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 550 similarity UNIPROT
DB: UniProtKB
  • Identity: 48.6
  • Coverage: 317.0
  • Bit_score: 302
  • Evalue 9.60e-79
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 316.0
  • Bit_score: 281
  • Evalue 2.70e-73

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Taxonomy

Paracoccus sp. 5503 → Paracoccus → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1008
ATGCCCTGCATTTCGCCACGTTCCGCGCCGCGCCGGCGCCAACTGTTCGCCTTCGCCGTCCTGTCGGGCGGCCTGCTTGCCACGGGAATGGCGTACGGCGCCGACGCCCCCTGGCCCACCCAGCCGGTCAAGCTCATCGTCGGCTTTCCCGCCGGCACCTCGCCCGACACGGTGGCCCGGCTGATCGCCGAGCCGCTGTCGCAGAAACTGGGCAAGCCGGTCATCGTCGAGAACAAGCCCGGCGCCGCCGGTAATATCGGCGTCGACCTGGTGGCGCGCGCCACCGACGGCCATACCTTCGGCGTCACCGCCCACGGCCCGCTGACCACCTCGGCCCTGCTCTACCCCAACCTGCCCTACAACGTCGCCCGGGACCTGCAACCCTTGTCATTGGCCGCGGTCAGCCCGCAGATCCTGGTCATCGATCCCAAGCTGCCCTATGCCACGCTGCACGACCTGCTGGCCGACGCGCGCGCCCACCACAAGGAAATCTCGTACGGATCGGTAGGCATGGGGTCGGGCTCGCACCTGACGGGCGAGCTGTTCGCGCAGGAAGCGGGCATCCGGATGATGCACGTGCCCTACCAAGGCTTCCCCCAGGTCACCATGGCCGTGATGAGCGGGCAGATCCAGGCGGGTTTCATGGCGCCCTCGGGGGCCATCGAACAGGCCAGGGCGGGCAAGGTGCGCGTACTGGGCGTCACGTCGGCGCAGCCTTCGCCACTGGCGCCGGGCGTGCCGACCGTCGCCCAGGCCGCGGGCCTGCCGGGCTTTGCCGCGGAACTGTGGATAGGCGCCTACGCGCCACGCGCCACGCCCGCGCCGGTGGCCGCCATGCTGGCGAAAGAGATCAACGCCATCCTGCGGTCGGACTCGGTACGGGCCAAGCTGGCGGCGCAGGGCTGGGATGCCACGGGCGGCTCGCCGGCCGAGATGGCGGCGCGCATCGAGACCGACACGCGCCGCTGGGGCGAGGTGATCAAGCGGCTGGGACTCAAGCTGGAATAG
PROTEIN sequence
Length: 336
MPCISPRSAPRRRQLFAFAVLSGGLLATGMAYGADAPWPTQPVKLIVGFPAGTSPDTVARLIAEPLSQKLGKPVIVENKPGAAGNIGVDLVARATDGHTFGVTAHGPLTTSALLYPNLPYNVARDLQPLSLAAVSPQILVIDPKLPYATLHDLLADARAHHKEISYGSVGMGSGSHLTGELFAQEAGIRMMHVPYQGFPQVTMAVMSGQIQAGFMAPSGAIEQARAGKVRVLGVTSAQPSPLAPGVPTVAQAAGLPGFAAELWIGAYAPRATPAPVAAMLAKEINAILRSDSVRAKLAAQGWDATGGSPAEMAARIETDTRRWGEVIKRLGLKLE*