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scnpilot_p_inoc_scaffold_4070

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_4070_1
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..388)
DNA (387bp) protein (129aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|HAMAP-Rule:MF_01676, ECO:0000256|SAAS:SAAS00087942}; EC=1.11.1.15 {ECO:0000256|HAMAP-Rule:MF_01676, ECO:0000256|SAAS:SAAS00087930};; Alkylhydroperoxidas
alkyl hydroperoxide reductase n=1 Tax=Kaistia granuli RepID=UPI000374C06A
alkylhydroperoxidase
scnpilot_p_inoc_scaffold_4070_2
Brucella sp. 83/13, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(461..1012)
DNA (552bp) protein (184aa)
alkyl hydroperoxide reductase n=1 Tax=Kaistia granuli RepID=UPI00036EF02A rbh
Alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen {ECO:0000313|EMBL:EEZ34189.1}; TaxID=520449 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Bru
ahpC; ahpC
scnpilot_p_inoc_scaffold_4070_3
Pseudovibrio sp. JE062, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1097..2107
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037D36DE rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EEA93832.1}; TaxID=439495 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Ps
transcriptional regulator, LysR family protein
scnpilot_p_inoc_scaffold_4070_4
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2104..2919
DNA (816bp) protein (272aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000365C9A8 rbh
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase
scnpilot_p_inoc_scaffold_4070_5
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2956..3447)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00036F2EC4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL05439.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium ja
scnpilot_p_inoc_scaffold_4070_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3527..4153)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003826AD3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61082.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
scnpilot_p_inoc_scaffold_4070_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4306..4983)
DNA (678bp) protein (226aa)
GntR family transcriptional regulator n=2 Tax=Xanthobacteraceae RepID=UPI00036C178B
GntR family transcriptional regulator {ECO:0000313|EMBL:KIZ47545.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhod
GntR family transcriptional regulator
scnpilot_p_inoc_scaffold_4070_8
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4980..5387)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000371621A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ70385.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 /
scnpilot_p_inoc_scaffold_4070_9
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5395..6174)
DNA (780bp) protein (260aa)
Putative 5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWR1_POLGS rbh
5-formyltetrahydrofolate cyclo-ligase rbh
Putative 5-formyltetrahydrofolate cyclo-ligase {ECO:0000313|EMBL:ADZ70386.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG
scnpilot_p_inoc_scaffold_4070_10
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6183..7583)
DNA (1401bp) protein (467aa)
Aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWR2_POLGS rbh
Aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
Aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A {ECO:0000313|EMBL:ADZ70387.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum
scnpilot_p_inoc_scaffold_4070_11
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7580..7762)
DNA (183bp) protein (61aa)
Uncharacterized protein {ECO:0000313|EMBL:KJB93934.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aer
scnpilot_p_inoc_scaffold_4070_12
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7778..8443)
DNA (666bp) protein (222aa)
Cysteine hydrolase {ECO:0000313|EMBL:KDR44345.1}; Isochorismatase {ECO:0000313|EMBL:CDY77601.1}; EC=3.3.2.1 {ECO:0000313|EMBL:CDY77601.1};; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobac
Putative isochorismatase family protein n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZEK7_ROSLO rbh
isochorismatase family protein
scnpilot_p_inoc_scaffold_4070_13
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8446..8694)
DNA (249bp) protein (83aa)
Predicted ABC-type uncharacterized transport system, ATPase component n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWR4_POLGS
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB09634.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinh
ABC transporter ATPase
Displaying 13 items

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