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scnpilot_p_inoc_scaffold_7913

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_7913_1
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..113)
DNA (111bp) protein (37aa)
50S ribosomal protein L5 n=1 Tax=Kaistia granuli RepID=UPI000372BCDA
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya
scnpilot_p_inoc_scaffold_7913_2
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(106..423)
DNA (318bp) protein (106aa)
50S ribosomal protein L24 n=1 Tax=Kaistia granuli RepID=UPI000381D18A
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lot
50S ribosomal protein L24
scnpilot_p_inoc_scaffold_7913_3
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(423..632)
DNA (210bp) protein (70aa)
50S ribosomal protein L14 n=2 Tax=Methylobacterium RepID=RL14_METS4
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosi
rplN; 50S ribosomal protein L14
scnpilot_p_inoc_scaffold_7913_4
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(705..953)
DNA (249bp) protein (83aa)
30S ribosomal protein S17 n=1 Tax=Amorphus coralli RepID=UPI00037197B9
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alex
30S ribosomal protein S17
scnpilot_p_inoc_scaffold_7913_5
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(964..1164)
DNA (201bp) protein (67aa)
50S ribosomal protein L29 n=1 Tax=Kaistia granuli RepID=UPI0003825ADD
50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000255|HAMAP-Rule:MF_00374}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativoran
scnpilot_p_inoc_scaffold_7913_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1191..1604)
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=1 Tax=Kaistia granuli RepID=UPI00037397E5
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.
rplP; 50S ribosomal protein L16
scnpilot_p_inoc_scaffold_7913_7
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1636..2349)
DNA (714bp) protein (238aa)
30S ribosomal protein S3 n=1 Tax=Kaistia granuli RepID=UPI000381CF2A rbh
30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9
scnpilot_p_inoc_scaffold_7913_8
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2349..2729)
DNA (381bp) protein (127aa)
50S ribosomal protein L22 n=1 Tax=Kaistia granuli RepID=UPI0003665EC9
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.
rplV; 50S ribosomal protein L22
scnpilot_p_inoc_scaffold_7913_9
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2731..3009)
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=1 Tax=Kaistia granuli RepID=UPI000375FFFC
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altam
30S ribosomal protein S19
scnpilot_p_inoc_scaffold_7913_10
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3022..3858)
DNA (837bp) protein (279aa)
50S ribosomal protein L2 n=1 Tax=Kaistia granuli RepID=UPI0003750C9E rbh
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobact
rplB; 50S ribosomal protein L2
scnpilot_p_inoc_scaffold_7913_11
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3881..4174)
DNA (294bp) protein (98aa)
50S ribosomal protein L23 n=1 Tax=Kaistia granuli RepID=UPI000367215F
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000255|HAMAP-Rule:MF_01369}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativoran
scnpilot_p_inoc_scaffold_7913_12
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4171..4791)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003673A59 rbh
rplD; 50S ribosomal protein L4
50S ribosomal protein L4 {ECO:0000255|HAMAP-Rule:MF_01328}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methyloba
scnpilot_p_inoc_scaffold_7913_13
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4791..5495)
DNA (705bp) protein (235aa)
50S ribosomal protein L3 n=1 Tax=Kaistia granuli RepID=UPI00036237F9 rbh
rplC; 50S ribosomal protein L3 rbh
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9
scnpilot_p_inoc_scaffold_7913_14
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5512..5820)
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=1 Tax=Kaistia granuli RepID=UPI0003816014
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratang
rpsJ; 30S ribosomal protein S10
scnpilot_p_inoc_scaffold_7913_15
Rhodomicrobium udaipurense, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5883..5996)
DNA (114bp) protein (38aa)
Elongation factor Tu n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3HZS2_RHOVT
translation elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacter
Displaying 15 items

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