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scnpilot_p_inoc_scaffold_5559_1

Organism: SCNpilot_P_inoc_Rhizobiales_67_4_fragment_2

partial RP 38 / 55 MC: 1 BSCG 35 / 51 MC: 1 ASCG 4 / 38
Location: 3..518

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=991905 species="Ba similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 169.0
  • Bit_score: 222
  • Evalue 3.80e-55
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036E10EB similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 168.0
  • Bit_score: 239
  • Evalue 2.80e-60
ligT; 2`-5` RNA ligase similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 169.0
  • Bit_score: 222
  • Evalue 7.60e-56

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Taxonomy

Polymorphum gilvum → Polymorphum → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
GTTCCGGTGGAGGTGGGCGAAAGGCTAGCCCTTCTCCGTGGCGGCCTGCCCGGCGCGCGCTGGATCGACGCGGACTTCTACCATGTGACGCTCCGCTTCATTGGCGACATCGATTTCCGCACGGCGGACGAGGTCGCCGAATCGCTGTCGCGGGTCCGCCGGCGCGAAATCCAGATCCAGCTCGACGGCCTCACCGCCTTCGGGACCTCGAAGCCGCATTCGATCGTCGCGCGGGTCGCACCGAGCCGGGCTCTCTCGGAATTGCAGGCCGAGCACGAACGCATCATGCAGCGCATCGGGCTGCCGGCGGAGGGGCGGCGCTTCATGCCGCATGTGACACTGGCGCGACTGCGCGGCACCAGCGAGCGGGAGGTCGCCTCCTATCTGGCGCTCCGCGGCGGCTTCTATGCCCCGCCATTCACGGCCAGCCGGTTCGTCCTCTTCTCCTCGCGCGATTCGGTTGGTGGCGGCCCCTATCTCGTGGAACACAGCTATCCGTTGGCGGTGGCGGCATGA
PROTEIN sequence
Length: 172
VPVEVGERLALLRGGLPGARWIDADFYHVTLRFIGDIDFRTADEVAESLSRVRRREIQIQLDGLTAFGTSKPHSIVARVAPSRALSELQAEHERIMQRIGLPAEGRRFMPHVTLARLRGTSEREVASYLALRGGFYAPPFTASRFVLFSSRDSVGGGPYLVEHSYPLAVAA*