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scnpilot_p_inoc_scaffold_5559

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_5559_1
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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3..518
DNA (516bp) protein (172aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=991905 species="Ba
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036E10EB
ligT; 2`-5` RNA ligase
scnpilot_p_inoc_scaffold_5559_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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515..814
DNA (300bp) protein (100aa)
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000255|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000255|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000255|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetra
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=PHS_RHOP2
scnpilot_p_inoc_scaffold_5559_3
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(806..2482)
DNA (1677bp) protein (559aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035EA1A1 rbh
Diguanylate cyclase {ECO:0000313|EMBL:EJW12869.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
GGDEF domain-containing protein
scnpilot_p_inoc_scaffold_5559_4
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2641..2826)
DNA (186bp) protein (62aa)
50S ribosomal protein L32 n=1 Tax=Kaistia granuli RepID=UPI0003815178
ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1401243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium
scnpilot_p_inoc_scaffold_5559_5
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2968..4080)
DNA (1113bp) protein (371aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|H
3-isopropylmalate dehydrogenase n=1 Tax=Kaistia granuli RepID=UPI00035F2A31 rbh
leuB; 3-isopropylmalate dehydrogenase
scnpilot_p_inoc_scaffold_5559_6
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4182..4562)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003745257
Endoribonuclease L-PSP {ECO:0000313|EMBL:EHK58593.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alha
hypothetical protein
scnpilot_p_inoc_scaffold_5559_7
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4694..5092
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037D2209
Succinate dehydrogenase, cytochrome b556 subunit {ECO:0000313|EMBL:EFO32795.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" sou
succinate dehydrogenase, cytochrome b556 subunit
scnpilot_p_inoc_scaffold_5559_8
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5103..5507
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000369B504
succinate dehydrogenase hydrophobic membrane anchor protein
Succinate dehydrogenase, hydrophobic membrane anchor protein {ECO:0000313|EMBL:ADV10180.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorh
scnpilot_p_inoc_scaffold_5559_9
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5510..7078
DNA (1569bp) protein (523aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobia
succinate dehydrogenase n=1 Tax=Kaistia granuli RepID=UPI00035FDA84
sdhA; succinate dehydrogenase flavoprotein subunit
Displaying 9 items

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