ggKbase home page

scnpilot_p_inoc_scaffold_1864

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1864_1
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1..567
DNA (567bp) protein (189aa)
Putative efflux protein, MATE family n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SUH4_9FLAO
Multidrug transporter MatE {ECO:0000313|EMBL:KIC94851.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumiba
MATE efflux family protein
scnpilot_p_inoc_scaffold_1864_2
unknown

Not on your lists

comp(628..732)
DNA (105bp) protein (35aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1864_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

882..1559
DNA (678bp) protein (226aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNP3_CHIPD
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACU64143.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" so
scnpilot_p_inoc_scaffold_1864_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2065..3294
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037811F6
Uncharacterized protein {ECO:0000313|EMBL:KIC94053.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
anti-FecI sigma factor FecR
scnpilot_p_inoc_scaffold_1864_5
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3514..6774
DNA (3261bp) protein (1087aa)
TonB-dependent receptor plug n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W1B9_DYAFD rbh
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ACT91976.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacte
scnpilot_p_inoc_scaffold_1864_6
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6799..8280
DNA (1482bp) protein (494aa)
RagB/SusD domain protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GQ23_9BACT rbh
RagB/SusD domain protein {ECO:0000313|EMBL:CCH56001.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
RagB/SusD domain-containing protein
scnpilot_p_inoc_scaffold_1864_7
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8326..9807
DNA (1482bp) protein (494aa)
hypothetical protein VspiD_32445 id=1904272 bin=GWE2_Bacteroidetes_42_39 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good + rbh
glucose-inhibited division protein A Tax=GWE2_Bacteroidetes_42_39_curated
glucose-inhibited division protein A
scnpilot_p_inoc_scaffold_1864_8
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9954..12641
DNA (2688bp) protein (896aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000369809E rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC93969.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_p_inoc_scaffold_1864_9
unknown

Not on your lists

12839..13009
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1864_10
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13046..14029)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9E4E0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKU91568.1}; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12
response regulator receiver protein
scnpilot_p_inoc_scaffold_1864_11
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14369..16063
DNA (1695bp) protein (565aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003730C5F
hypothetical protein Tax=GWA2_Bacteroidetes_31_9_curated
hypothetical protein
Displaying 11 items

View Taxonomy