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scnpilot_p_inoc_scaffold_2036

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2036_1
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3..872)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003818C14
sulfatase
Sulfatase {ECO:0000313|EMBL:ADB37301.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / L
scnpilot_p_inoc_scaffold_2036_2
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1109..2002
DNA (894bp) protein (298aa)
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:KHJ39041.1}; EC=3.1.4.46 {ECO:0000313|EMBL:KHJ39041.1};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteria
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI000364F5BE
glycerophosphoryl diester phosphodiesterase
scnpilot_p_inoc_scaffold_2036_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2223..3152)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJQ8_NIAKG rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00805.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
scnpilot_p_inoc_scaffold_2036_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3149..3742)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJQ7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00804.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
scnpilot_p_inoc_scaffold_2036_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3744..4298)
DNA (555bp) protein (185aa)
RNA polymerase sigma factor n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJQ6_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koree
scnpilot_p_inoc_scaffold_2036_6
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4499..5020
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003665F7E
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family {ECO:0000313|EMBL:ACU59453.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae;
scnpilot_p_inoc_scaffold_2036_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5207..6022)
DNA (816bp) protein (272aa)
Phospholipase/Carboxylesterase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH84_NIAKG
phospholipase/Carboxylesterase
Phospholipase/Carboxylesterase {ECO:0000313|EMBL:AEW01694.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" sou
scnpilot_p_inoc_scaffold_2036_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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6110..7189
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003758426
YjgP/YjgQ family permease Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
permease
scnpilot_p_inoc_scaffold_2036_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7438..8763
DNA (1326bp) protein (442aa)
citrate (Si)-synthase; K01647 citrate synthase [EC:2.3.3.1] Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
type I citrate synthase n=1 Tax=Segetibacter koreensis RepID=UPI00037C492C
citrate (Si)-synthase
scnpilot_p_inoc_scaffold_2036_10
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(9059..9823)
DNA (765bp) protein (255aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y951_9SPHI rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EHQ29089.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Muci
3-oxoacyl-(acyl-carrier-protein) reductase
scnpilot_p_inoc_scaffold_2036_11
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9909..10826
DNA (918bp) protein (306aa)
Transcriptional regulator, AraC family n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y950_9SPHI rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EHQ29088.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" sour
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_2036_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10919..11557
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFY0_CHIPD
Lactate utilization protein B/C {ECO:0000313|EMBL:KIC96073.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavih
hypothetical protein
scnpilot_p_inoc_scaffold_2036_13
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11589..14519
DNA (2931bp) protein (977aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5ZMP0_9PORP rbh
Uncharacterized protein {ECO:0000313|EMBL:EKN12555.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldste
Displaying 13 items

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