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scnpilot_p_inoc_scaffold_1470_35

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(38333..39292)

Top 3 Functional Annotations

Value Algorithm Source
Anti-FecI sigma factor, FecR n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6X7E8_METSD similarity UNIREF
DB: UNIREF100
  • Identity: 39.4
  • Coverage: 330.0
  • Bit_score: 214
  • Evalue 1.80e-52
Uncharacterized protein {ECO:0000313|EMBL:KJK05761.1}; TaxID=1619949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 5 similarity UNIPROT
DB: UniProtKB
  • Identity: 42.8
  • Coverage: 320.0
  • Bit_score: 230
  • Evalue 3.40e-57
anti-FecI sigma factor FecR similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 330.0
  • Bit_score: 214
  • Evalue 5.00e-53

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Taxonomy

Pseudomonas sp. 5 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
TTGAGCCGGGTACACGAAGAGGCGGCGCGCTGGTTCGCCCGCATGCACAACGCAGAAGCCGACGACCCGGAGCGGGGCCGTTTCGAAGCCTGGCTGGCAAGCAACCCGGAGCACGCCCGTGAATACGCCGCCTTCGAGAACTTCTGGCAGCGCCTGGACAACGCCAAGAGCTGGGACGCCATCAGCCAGGGGCTGGAGCAGCGGCGCCAGCAGCGCCGGCAGGCGCTCAAGCACGGGCTGAGCGCCGTTCTGCTGGCCGGCCTGGGCGGAGAGGCCATCTGGTGGCAATGGCGCAACACCGCCGTCTGGACCACCGCCCTGCGCAGTGAAACCGGCCAGCCCCGGCGCGGCGCACTCGGCGACGGCAGCCAGCTCTCGCTCGGTGCCGCCAGCGCGGCCGACATCGTCTACAGCCGGGCCGAACGCCGCGTGGCCCTCCAGCAAGGCGAGGCCGCCTTCGACGTCGTGCATGACGGCGGCCGCCCCTTCATCGTCGAGGCCGGCGGCCTGCGCGTCACCGTGCTCGGCACGCGCTTTGCCGTCAATCGGCTCGCCGACCGCACCCGGGTCAGCGTCGATCACGGGCGCGTCCAGGTCGAGACCGGCCCCTTCTGGCGGCGCCAGCGCATCCTGCTGCACAACGGCGAAGTGGCCGAACTCTCCGCGCCGGCCAGCGCACAGGCCCAGCTCGCCCGCGTCCCGCACGACGCGGCCGGCGCCTTTGCCTTCGAACGAGGATTCATCGACCTGCGCAATGCGGACCTTGCCGAAATCGCCACCACCTTCTCGCGCTACCGCCAGGCGCCTGTCGTACTCGCAGGCCCGGCCGGGAAGGATTCGCGCGTGACCGCTTCGGTCAGCGTGGCCGACGCCGAGAGCTTCTTGCGGCTGCTGCCCCAGATGGCCCCCGTCAATGTCCACATCGAGGCCGACGGAACGGCGGTCATACAGCGGCGCTGA
PROTEIN sequence
Length: 320
LSRVHEEAARWFARMHNAEADDPERGRFEAWLASNPEHAREYAAFENFWQRLDNAKSWDAISQGLEQRRQQRRQALKHGLSAVLLAGLGGEAIWWQWRNTAVWTTALRSETGQPRRGALGDGSQLSLGAASAADIVYSRAERRVALQQGEAAFDVVHDGGRPFIVEAGGLRVTVLGTRFAVNRLADRTRVSVDHGRVQVETGPFWRRQRILLHNGEVAELSAPASAQAQLARVPHDAAGAFAFERGFIDLRNADLAEIATTFSRYRQAPVVLAGPAGKDSRVTASVSVADAESFLRLLPQMAPVNVHIEADGTAVIQRR*