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scnpilot_p_inoc_scaffold_1470_36

Organism: SCNpilot_P_inoc_Burkholderiales_68_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(39289..39819)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6X7E9_METSD similarity UNIREF
DB: UNIREF100
  • Identity: 51.2
  • Coverage: 172.0
  • Bit_score: 170
  • Evalue 1.30e-39
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 172.0
  • Bit_score: 170
  • Evalue 3.50e-40
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACT51414.1}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 172.0
  • Bit_score: 170
  • Evalue 1.80e-39

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Taxonomy

Methylovorus glucosotrophus → Methylovorus → Methylophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGAAAGCATCTGTACGTCAGGGAAACGAGATTTGGCACGGGGTGGATTTGCGGTGGGCATACGCCGATCTGCTCGGTGGCATCAAACGGCGCACGGGGTGTGTGCATCGCGCATCCGACGTGCTGCATGACGCCTTGATCCGTCTCGCGCTGACGGCGGCCCGCGAACCCATCGCGCAGCCGCATGCCTACCTGCGCACCGTGGTCAGTTCCGTGCTGTCCGACCATCGCCGCAACGACGCACGCTGGATCTGCCTGCCCGATTATGAAGACTGGGTGGCTGAAGGCGACTTTGCCGGCACCACCCCATCGGCAGAACATATGGCACAGTTGCGCGCCGGCCTGGAAGCAGCGCAACGCGTACTCGACCACCTGCCGGCCAAGCGGCGCGACATTTTCTGGCTGTTCCGCATCGACGGATTCAGTTGCCGCGAGATCGCCGAACGCCTCGGCATTTCCGTGCGCGCCGTGGAAAACCATGTCATGCGCACCATGGTCGATCTGCGCGCTGCCGAGGAACTGGCAGCTTGA
PROTEIN sequence
Length: 177
MKASVRQGNEIWHGVDLRWAYADLLGGIKRRTGCVHRASDVLHDALIRLALTAAREPIAQPHAYLRTVVSSVLSDHRRNDARWICLPDYEDWVAEGDFAGTTPSAEHMAQLRAGLEAAQRVLDHLPAKRRDIFWLFRIDGFSCREIAERLGISVRAVENHVMRTMVDLRAAEELAA*