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scnpilot_p_inoc_scaffold_52

Search features with annotation key words

Displaying items 121-150 of 268 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_52_121
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143023..143667)
DNA (645bp) protein (215aa)
Mota/tolq/exbb proton channel n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0L5_9BURK rbh
MotA/TolQ/ExbB proton channel Tax=GWA2_Burkholderiales_64_37_curated
MotA/TolQ/ExbB proton channel
scnpilot_p_inoc_scaffold_52_122
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

144020..145345
DNA (1326bp) protein (442aa)
exodeoxyribonuclease VII n=1 Tax=Acidovorax radicis RepID=UPI000237513E rbh
exodeoxyribonuclease VII large subunit Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
exodeoxyribonuclease VII large subunit
scnpilot_p_inoc_scaffold_52_123
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

145556..146137
DNA (582bp) protein (194aa)
Superoxide dismutase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0L3_9BURK rbh
superoxide dismutase Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
superoxide dismutase
scnpilot_p_inoc_scaffold_52_124
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146421..146918)
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0L2_9BURK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_52_125
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

147532..148791
DNA (1260bp) protein (420aa)
isocitrate dehydrogenase (EC:1.1.1.42) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
isocitrate dehydrogenase (EC:1.1.1.42)
isocitrate dehydrogenase n=1 Tax=Acidovorax radicis RepID=UPI0002375F00 rbh
scnpilot_p_inoc_scaffold_52_126
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

149073..150923
DNA (1851bp) protein (617aa)
histidine kinase n=1 Tax=Acidovorax radicis RepID=UPI0002375EFF rbh
histidine protein kinase Tax=GWA2_Burkholderiales_64_37_curated
histidine protein kinase
scnpilot_p_inoc_scaffold_52_127
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150920..151315
DNA (396bp) protein (132aa)
chemotaxis protein CheY n=1 Tax=Acidovorax radicis RepID=UPI0002375EFE
response regulator receiver protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
response regulator receiver protein
scnpilot_p_inoc_scaffold_52_128
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

151334..154951
DNA (3618bp) protein (1206aa)
diguanylate cyclase n=1 Tax=Acidovorax radicis RepID=UPI0002375EFD rbh
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=GWA2_Burkholderiales_64_37_curated
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
scnpilot_p_inoc_scaffold_52_129
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155115..155864)
DNA (750bp) protein (250aa)
glutamine amidotransferase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
Glutamine amidotransferase class-I n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TIZ4_ACIAC
glutamine amidotransferase
scnpilot_p_inoc_scaffold_52_130
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155861..157306)
DNA (1446bp) protein (482aa)
ABC transporter ATP-binding protein n=1 Tax=Acidovorax radicis RepID=UPI0002375EFC rbh
ABC transporter; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
ABC transporter
scnpilot_p_inoc_scaffold_52_131
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(157303..158145)
DNA (843bp) protein (281aa)
ABC transporter permease n=1 Tax=Acidovorax radicis RepID=UPI0002375EFB rbh
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
binding-protein-dependent transport systems inner membrane component
scnpilot_p_inoc_scaffold_52_132
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(158142..159110)
DNA (969bp) protein (323aa)
ABC transporter permease n=1 Tax=Acidovorax radicis RepID=UPI0002375EFA rbh
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
binding-protein-dependent transport systems inner membrane component
scnpilot_p_inoc_scaffold_52_133
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(159107..160660)
DNA (1554bp) protein (518aa)
ABC transporter substrate-binding protein n=1 Tax=Acidovorax radicis RepID=UPI0002375EF9 rbh
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
family 5 extracellular solute-binding protein
scnpilot_p_inoc_scaffold_52_134
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160739..162850)
DNA (2112bp) protein (704aa)
membrane protein n=1 Tax=Acidovorax radicis RepID=UPI0002375EF7 rbh
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
tonb-dependent siderophore receptor
scnpilot_p_inoc_scaffold_52_135
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(163263..163652)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002375EF6
hypothetical protein Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_52_136
Nocardia otitidiscaviarum, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(163921..165072)
DNA (1152bp) protein (384aa)
NotI restriction endonuclease n=1 Tax=Nocardia otitidiscaviarum RepID=Q2I6W2_9NOCA
NotI restriction endonuclease {ECO:0000313|EMBL:ABC87270.1}; TaxID=1823 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia otitidiscaviarum.;"
scnpilot_p_inoc_scaffold_52_137
Nocardia otitidiscaviarum, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(165035..166006)
DNA (972bp) protein (324aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1823 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocar
M.NotI DNA methyltransferase n=1 Tax=Nocardia otitidiscaviarum RepID=Q2I6W3_9NOCA rbh
DNA methyltransferase
scnpilot_p_inoc_scaffold_52_138
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(166169..167053)
DNA (885bp) protein (295aa)
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Acidovorax radicis RepID=UPI0002375EF4 rbh
3-hydroxyisobutyrate dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
3-hydroxyisobutyrate dehydrogenase
scnpilot_p_inoc_scaffold_52_139
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(167172..167573)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002375EF3
hypothetical protein Tax=GWA2_Burkholderiales_64_37_curated
hypothetical protein
scnpilot_p_inoc_scaffold_52_140
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(167608..168072)
DNA (465bp) protein (155aa)
transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002375EF2 rbh
hypothetical protein Tax=GWA2_Burkholderiales_64_37_curated
hypothetical protein
scnpilot_p_inoc_scaffold_52_141
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(168289..169455)
DNA (1167bp) protein (389aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0J9_9BURK rbh
acyl-CoA dehydrogenase domain-containing protein Tax=GWA2_Burkholderiales_64_37_curated
acyl-CoA dehydrogenase domain-containing protein
scnpilot_p_inoc_scaffold_52_142
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169498..169920)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1L4_9BURK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_52_143
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(170118..171641)
DNA (1524bp) protein (508aa)
methylmalonate-semialdehyde dehydrogenase n=1 Tax=Acidovorax radicis RepID=UPI0002375EEF rbh
methylmalonate-semialdehyde dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
methylmalonate-semialdehyde dehydrogenase
scnpilot_p_inoc_scaffold_52_144
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(171919..172464)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002375EEE
phage tail collar domain-containing protein Tax=GWA2_Burkholderiales_64_37_curated
phage tail collar domain-containing protein
scnpilot_p_inoc_scaffold_52_145
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(172476..173666)
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002375EED rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_52_146
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(173663..174688)
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002375EEC rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_52_147
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(174676..175527)
DNA (852bp) protein (284aa)
aspartyl/asparaginyl beta-hydroxylase n=1 Tax=Acidovorax radicis RepID=UPI0002375B9F rbh
aspartyl/asparaginyl beta-hydroxylase Tax=GWA2_Burkholderiales_64_37_curated
aspartyl/asparaginyl beta-hydroxylase
scnpilot_p_inoc_scaffold_52_148
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(175524..176366)
DNA (843bp) protein (281aa)
triple helix repeat-containing collagen n=1 Tax=Acidovorax radicis RepID=UPI0002375B9E rbh
triple helix repeat-containing collagen Tax=GWA2_Burkholderiales_64_37_curated
triple helix repeat-containing collagen
scnpilot_p_inoc_scaffold_52_149
unknown

Not on your lists

comp(176379..176561)
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_52_150
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

176715..177743
DNA (1029bp) protein (343aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002375B9C rbh
LysR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
LysR family transcriptional regulator
Displaying items 121-150 of 268 in total

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