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scnpilot_p_inoc_scaffold_52_148

Organism: SCNpilot_P_inoc_Acidovorax_64_34

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: comp(175524..176366)

Top 3 Functional Annotations

Value Algorithm Source
triple helix repeat-containing collagen n=1 Tax=Acidovorax radicis RepID=UPI0002375B9E similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 283.0
  • Bit_score: 470
  • Evalue 9.30e-130
  • rbh
triple helix repeat-containing collagen Tax=GWA2_Burkholderiales_64_37_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 280.0
  • Bit_score: 570
  • Evalue 1.20e-159
triple helix repeat-containing collagen similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 271.0
  • Bit_score: 245
  • Evalue 1.40e-62

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Taxonomy

GWA2_Burkholderiales_64_37_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 843
ATGAAACGCACCACTTTTCCCTATAAGTCGCTTTGGGCTGGTCCGGCCTGCCTGGCACTGGCCACTGTGTCCGTCCACGCTGCGGATATAAGTTTCACGCCCCCGGCAGGTGGTGGATTCGTGGTCAAGGGGCCGGGCAATACCGAGCGCCTGCGCGTACAAGACTCTGGCGAAGTGCGGGTTCCCAGTCTCTCGGGAACGGCCAACACCAATGCCAATGTGCTGTGTTTTGACGGCCCGACCGGGCGTCTGGGCCAATGTGCTCCCGGGGTCACCACCGGAGCGACAGGCGCCACCGGTGCAACAGGAGCAACAGGCCCGGCGGGCCTGACAGGGGCTACAGGCGCCACCGGCCCGGCCGGTGCCACCGGCGCCACGGGCAGCGCAGGTCCAACGGGTGCCACGGGCTCGGCCGGCGCTACAGGCGCTACCGGACCAGCGGGAACACCCGGCGCCCAGGGAACAGCAGGCCTTACCGGCGCCACGGGTGCCACCGGCTCGGTGGGCCCGGCAGGTGCCACGGGGGCCACCGGTCCCCAGGGTCCTGCAGGCAGCAACGCGATCACCGTCAATATTCGGCCAGCCACTGGCACAGGCACGGCAGACAGCTGCGCTGTGACCTCCTGCTGCAATGCGGGCGAGAAAGTCATCGGCGGCGGTTACGAAGGGGCCAGTGGCGCAGGGGGGATCGACGCAGACGGTGTATACGTGGCGGCCAACCGTCCCGTCGAAGGCGGTGCTTGTGCGGCCGGGGTGCAGGGCTGGTCAGTCCGCCTGCTCAACTCCTACCGCGTTCCCGCTTTGACGACCGCCTGCAGTGCTTACGCCATCTGCACGCAATGA
PROTEIN sequence
Length: 281
MKRTTFPYKSLWAGPACLALATVSVHAADISFTPPAGGGFVVKGPGNTERLRVQDSGEVRVPSLSGTANTNANVLCFDGPTGRLGQCAPGVTTGATGATGATGATGPAGLTGATGATGPAGATGATGSAGPTGATGSAGATGATGPAGTPGAQGTAGLTGATGATGSVGPAGATGATGPQGPAGSNAITVNIRPATGTGTADSCAVTSCCNAGEKVIGGGYEGASGAGGIDADGVYVAANRPVEGGACAAGVQGWSVRLLNSYRVPALTTACSAYAICTQ*