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scnpilot_p_inoc_scaffold_301

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Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_301_1

Not on your lists

comp(2..79)
DNA (78bp) protein (26aa)
Marine sediment metagenome DNA, contig: S12H4_S07890 {ECO:0000313|EMBL:GAI97657.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
scnpilot_p_inoc_scaffold_301_2
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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706..2865
DNA (2160bp) protein (720aa)
Putative KAP P-loop domain protein n=1 Tax=Burkholderia pseudomallei Pakistan 9 RepID=C0YE03_BURPE rbh
AAA ATPase domain protein {ECO:0000313|EMBL:AIO87314.1}; TaxID=28450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" sourc
KAP P-loop domain-containing protein rbh
scnpilot_p_inoc_scaffold_301_3
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3189..4154
DNA (966bp) protein (322aa)
membrane protein n=1 Tax=Acidovorax radicis RepID=UPI0002376263 rbh
hypothetical protein Tax=GWA2_Burkholderiales_64_37_curated
hypothetical protein
scnpilot_p_inoc_scaffold_301_4
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4220..5122)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376264 rbh
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_301_5
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5524..6594
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUG4_9BURK rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_301_6
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6695..10477)
DNA (3783bp) protein (1261aa)
bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase n=1 Tax=Acidovorax radicis RepID=UPI0002376266 rbh
delta-1-pyrroline-5-carboxylate dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
delta-1-pyrroline-5-carboxylate dehydrogenase
scnpilot_p_inoc_scaffold_301_7
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10581..11054
DNA (474bp) protein (158aa)
AsnC family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002376267 rbh
asnC family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
asnC family transcriptional regulator
scnpilot_p_inoc_scaffold_301_8
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11164..11475
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376268
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
hypothetical protein
scnpilot_p_inoc_scaffold_301_9
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11531..12994
DNA (1464bp) protein (488aa)
23S rRNA methyltransferase n=1 Tax=Acidovorax radicis RepID=UPI0002376269 rbh
rumA; 23S rRNA m(5)U1939 methyltransferase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
rumA; 23S rRNA m(5)U1939 methyltransferase
scnpilot_p_inoc_scaffold_301_10
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13055..13429)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI000237626A
hypothetical protein Tax=GWA2_Burkholderiales_64_37_curated
hypothetical protein
scnpilot_p_inoc_scaffold_301_11
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13547..14242)
DNA (696bp) protein (232aa)
membrane protein n=1 Tax=Acidovorax radicis RepID=UPI000237626B rbh
hypothetical protein Tax=GWA2_Burkholderiales_64_37_curated
hypothetical protein
scnpilot_p_inoc_scaffold_301_12
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14494..14901
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IBA7_9BURK
hypothetical protein
hypothetical protein Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_301_13
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15193..15414)
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BVB2_9BURK
hypothetical protein Tax=GWA2_Burkholderiales_64_37_curated
hypothetical protein
scnpilot_p_inoc_scaffold_301_14
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15682..16092)
DNA (411bp) protein (137aa)
biopolymer transporter ExbD n=1 Tax=Acidovorax radicis RepID=UPI0002376954
biopolymer transport protein ExbD/TolR Tax=GWA2_Burkholderiales_64_37_curated
biopolymer transport protein ExbD/TolR
scnpilot_p_inoc_scaffold_301_15
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16096..16815)
DNA (720bp) protein (240aa)
MotA/TolQ/ExbB proton channel n=1 Tax=Acidovorax radicis RepID=UPI00023765F6 rbh
MotA/TolQ/ExbB proton channel Tax=GWA2_Burkholderiales_64_37_curated
MotA/TolQ/ExbB proton channel
scnpilot_p_inoc_scaffold_301_16
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16855..17544)
DNA (690bp) protein (230aa)
cell envelope biogenesis protein TonB n=1 Tax=Acidovorax radicis RepID=UPI00023765F5 rbh
TonB family protein Tax=GWA2_Burkholderiales_64_37_curated
TonB family protein
scnpilot_p_inoc_scaffold_301_17
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17643..17915)
DNA (273bp) protein (91aa)
ferredoxin n=1 Tax=Acidovorax radicis RepID=UPI00023765F4
bfd domain-containing protein (2fe-2S)-binding domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
bfd domain-containing protein (2fe-2S)-binding domain-containing protein
scnpilot_p_inoc_scaffold_301_18
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18032..19165)
DNA (1134bp) protein (378aa)
FMN-dependent alpha-hydroxy acid dehydrogenase; K00104 glycolate oxidase [EC:1.1.3.15] Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
2-hydroxy-acid oxidase n=1 Tax=Acidovorax radicis RepID=UPI00023765F3 rbh
FMN-dependent alpha-hydroxy acid dehydrogenase
scnpilot_p_inoc_scaffold_301_19
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19162..19845)
DNA (684bp) protein (228aa)
putative hydroxylase; K07336 PKHD-type hydroxylase [EC:1.14.11.-] Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
nuclease PIN n=1 Tax=Acidovorax radicis RepID=UPI00023765F2 rbh
putative hydroxylase
scnpilot_p_inoc_scaffold_301_20
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20007..22304)
DNA (2298bp) protein (766aa)
TonB-denpendent receptor n=1 Tax=Acidovorax radicis RepID=UPI00023765F1 rbh
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
TonB-dependent siderophore receptor rbh
scnpilot_p_inoc_scaffold_301_21
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22527..22847)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI00023765F0
swib/mdm2 domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
swib/mdm2 domain-containing protein
scnpilot_p_inoc_scaffold_301_22
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23250..23768
DNA (519bp) protein (173aa)
ribonuclease n=1 Tax=Acidovorax radicis RepID=UPI00023765EF rbh
ribonuclease activity regulator protein RraA Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
ribonuclease activity regulator protein RraA
scnpilot_p_inoc_scaffold_301_23
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23786..24748)
DNA (963bp) protein (321aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BVC4_9BURK rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_301_24
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24787..25209
DNA (423bp) protein (141aa)
gamma-glutamyl cyclotransferase n=1 Tax=Acidovorax radicis RepID=UPI00023765ED
AIG2 family protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
AIG2 family protein
scnpilot_p_inoc_scaffold_301_25
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25474..26805
DNA (1332bp) protein (444aa)
isocitrate lyase n=1 Tax=Acidovorax radicis RepID=UPI00023765EC rbh
isocitrate lyase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
isocitrate lyase
scnpilot_p_inoc_scaffold_301_26
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26965..28905)
DNA (1941bp) protein (647aa)
UPI0003D3E601 related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI0003D3E601 rbh
UPI0003D3E601 related cluster Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_301_27
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28960..29355)
DNA (396bp) protein (132aa)
membrane protein n=1 Tax=Paenibacillus elgii RepID=UPI000248C879
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
membrane protein
scnpilot_p_inoc_scaffold_301_28
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29462..30427)
DNA (966bp) protein (322aa)
glycosyl transferase n=1 Tax=Acidovorax radicis RepID=UPI000237716A rbh
family 2 glycosyl transferase Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
glycosyl transferase family protein
scnpilot_p_inoc_scaffold_301_29
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30981..32900
DNA (1920bp) protein (640aa)
thrS; threonyl-tRNA synthetase (EC:3.1.1.- 6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
thrS; threonyl-tRNA synthetase (EC:3.1.1.- 6.1.1.3)
threonyl-tRNA synthetase n=1 Tax=Acidovorax radicis RepID=UPI0002377169 rbh
scnpilot_p_inoc_scaffold_301_30
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33053..33589
DNA (537bp) protein (179aa)
Translation initiation factor IF-3 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T3R0_ACIDE rbh
translation initiation factor IF-3; K02520 translation initiation factor IF-3 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
translation initiation factor IF-3
Displaying items 1-30 of 100 in total

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