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scnpilot_p_inoc_scaffold_475

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_475_1
unknown

Not on your lists

comp(3..68)
DNA (66bp) protein (22aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_475_2
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(31..552)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AYB9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EIQ00011.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_475_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(590..1492)
DNA (903bp) protein (301aa)
type III restriction protein res subunit; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Type III restriction protein res subunit id=1261954 bin=GWE1_Burkholderiales_65_30 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
type III restriction protein res subunit
scnpilot_p_inoc_scaffold_475_4
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1723..3408
DNA (1686bp) protein (562aa)
long-chain-fatty-acid--CoA ligase (EC:2.3.1.86); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] Tax=GWA2_Burkholderiales_64_37_curated
long-chain-fatty-acid--CoA ligase (EC:2.3.1.86)
long-chain fatty acid--CoA ligase n=1 Tax=Acidovorax radicis RepID=UPI0002376645 rbh
scnpilot_p_inoc_scaffold_475_5
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3528..3902)
DNA (375bp) protein (125aa)
pilus biosynthesis protein PilZ n=1 Tax=Acidovorax radicis RepID=UPI0002377EE7
type IV pilus assembly PilZ Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
type IV pilus assembly PilZ
scnpilot_p_inoc_scaffold_475_6
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4046..7009
DNA (2964bp) protein (988aa)
diguanylate cyclase n=1 Tax=Acidovorax radicis RepID=UPI0002377EE8 rbh
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=GWA2_Burkholderiales_64_37_curated
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
scnpilot_p_inoc_scaffold_475_7
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7242..7733
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377EE9 rbh
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
hypothetical protein
scnpilot_p_inoc_scaffold_475_8
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7863..8639
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377EEA rbh
hypothetical protein Tax=GWA2_Burkholderiales_64_37_curated
hypothetical protein rbh
scnpilot_p_inoc_scaffold_475_9
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8777..9214
DNA (438bp) protein (146aa)
universal stress protein UspA n=1 Tax=Acidovorax radicis RepID=UPI0002377EEB
UspA domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
UspA domain-containing protein
scnpilot_p_inoc_scaffold_475_10
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9302..10114)
DNA (813bp) protein (271aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
peptide methionine sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0I8_9BURK rbh
scnpilot_p_inoc_scaffold_475_11
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10197..11180)
DNA (984bp) protein (328aa)
LacI family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002377EEC rbh
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
hypothetical protein
scnpilot_p_inoc_scaffold_475_12
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11357..12541)
DNA (1185bp) protein (395aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
beta-ketothiolase (EC:2.3.1.9)
Beta-ketothiolase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0I6_9BURK rbh
scnpilot_p_inoc_scaffold_475_13
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12635..13396)
DNA (762bp) protein (254aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0I5_9BURK rbh
short-chain dehydrogenase/reductase sdr Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
short-chain dehydrogenase/reductase sdr
scnpilot_p_inoc_scaffold_475_14
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13436..13951)
DNA (516bp) protein (172aa)
MarR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002377EEF rbh
MarR family transcriptional regulator Tax=GWA2_Burkholderiales_64_37_curated
MarR family transcriptional regulator
scnpilot_p_inoc_scaffold_475_15
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14039..14923
DNA (885bp) protein (295aa)
ABC transporter permease n=1 Tax=Acidovorax radicis RepID=UPI0002377EF0 rbh
hypothetical protein; K15269 probable blue pigment (indigoidine) exporter Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_475_16
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15042..16703)
DNA (1662bp) protein (554aa)
methyl-accepting chemotaxis protein n=1 Tax=Acidovorax radicis RepID=UPI0002378270 rbh
methyl-accepting chemotaxis sensory transducer Tax=GWA2_Burkholderiales_64_37_curated
methyl-accepting chemotaxis sensory transducer
scnpilot_p_inoc_scaffold_475_17
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16790..17863)
DNA (1074bp) protein (358aa)
sulfotransferase n=1 Tax=Acidovorax radicis RepID=UPI0002378271 rbh
sulfotransferase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
sulfotransferase domain protein
scnpilot_p_inoc_scaffold_475_18
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17860..18885)
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002378272 rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_475_19
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18914..19594)
DNA (681bp) protein (227aa)
adenylylsulfate kinase; K00860 adenylylsulfate kinase [EC:2.7.1.25] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
cysc1; Adenylyl-sulfate kinase (EC:2.7.1.25)
adenylylsulfate kinase n=1 Tax=Acidovorax radicis RepID=UPI0002378273 rbh
scnpilot_p_inoc_scaffold_475_20
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19646..20200)
DNA (555bp) protein (185aa)
acyl-homoserine-lactone synthase (EC:2.3.1.184) Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
acyl-homoserine-lactone synthase (EC:2.3.1.184)
N-acylhomoserine lactone synthase n=1 Tax=Acidovorax radicis RepID=UPI0002378274 rbh
scnpilot_p_inoc_scaffold_475_21
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20420..21133
DNA (714bp) protein (238aa)
LuxR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002378275 rbh
LuxR family transcriptional regulator; K07782 LuxR family transcriptional regulator Tax=GWA2_Burkholderiales_64_37_curated
transcriptional activator of quorum sensing autoinducer synthesis transcription regulator protein (LuxR family)
scnpilot_p_inoc_scaffold_475_22
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21192..21635
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002378276
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
hypothetical protein
scnpilot_p_inoc_scaffold_475_23
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21702..22388)
DNA (687bp) protein (229aa)
pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
pseudouridine synthase n=1 Tax=Acidovorax radicis RepID=UPI0002378277 rbh
pseudouridine synthase
scnpilot_p_inoc_scaffold_475_24
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22375..24600)
DNA (2226bp) protein (742aa)
histidine kinase n=1 Tax=Acidovorax radicis RepID=UPI0002378278 rbh
PAS/PAC sensor hybrid histidine kinase Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
PAS/PAC sensor hybrid histidine kinase
scnpilot_p_inoc_scaffold_475_25
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24907..25569
DNA (663bp) protein (221aa)
nitroreductase n=1 Tax=Acidovorax radicis RepID=UPI0002378279 rbh
nitroreductase Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
nitroreductase
scnpilot_p_inoc_scaffold_475_26
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25644..26996)
DNA (1353bp) protein (451aa)
MFS transporter n=1 Tax=Acidovorax radicis RepID=UPI000237827A rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_475_27
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26986..28266)
DNA (1281bp) protein (427aa)
hypothetical protein; K11941 glucans biosynthesis protein C [EC:2.1.-.-] Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
acyltransferase n=1 Tax=Acidovorax radicis RepID=UPI000237827B rbh
hypothetical protein
scnpilot_p_inoc_scaffold_475_28
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28339..29379)
DNA (1041bp) protein (347aa)
MerR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI000237827C rbh
antibiotic resistance transcriptional regulator, MerR family Tax=GWA2_Burkholderiales_64_37_curated
antibiotic resistance transcriptional regulator, MerR family
scnpilot_p_inoc_scaffold_475_29
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29384..29791)
DNA (408bp) protein (136aa)
peptidyl-prolyl isomerase (EC:5.2.1.8); K03772 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] Tax=GWA2_Burkholderiales_64_37_curated
peptidyl-prolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C1N2_9BURK
scnpilot_p_inoc_scaffold_475_30
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30063..31265
DNA (1203bp) protein (401aa)
soxC; sulfite oxidase (EC:1.8.3.1) Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
soxC; sulfite oxidase (EC:1.8.3.1)
Sulfite oxidase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C1N3_9BURK rbh
Displaying items 1-30 of 70 in total

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