ggKbase home page

scnpilot_p_inoc_scaffold_555

Search features with annotation key words

Displaying items 31-60 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_555_31
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35377..36060
DNA (684bp) protein (228aa)
ABC transporter-like protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C3R3_9BURK rbh
ABC transporter-like protein Tax=GWA2_Burkholderiales_64_37_curated
ABC transporter-like protein
scnpilot_p_inoc_scaffold_555_32
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36057..37295
DNA (1239bp) protein (413aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C3R2_9BURK rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_555_33
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37355..37606
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376978
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
hypothetical protein
scnpilot_p_inoc_scaffold_555_34
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37667..38359
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376977 rbh
hypothetical protein Tax=GWA2_Burkholderiales_64_37_curated
hypothetical protein
scnpilot_p_inoc_scaffold_555_35
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38406..38888
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376976
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_555_36
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39170..41308
DNA (2139bp) protein (713aa)
TonB-denpendent receptor n=1 Tax=Acidovorax radicis RepID=UPI0002376975 rbh
TonB-dependent receptor Tax=GWA2_Burkholderiales_64_37_curated
TonB-dependent receptor
scnpilot_p_inoc_scaffold_555_37
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41478..43100
DNA (1623bp) protein (541aa)
diguanylate cyclase n=1 Tax=Acidovorax radicis RepID=UPI0002376974 rbh
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
scnpilot_p_inoc_scaffold_555_38
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43402..43752)
DNA (351bp) protein (117aa)
RNP-1 like RNA-binding protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I8C1_9BURK
RNP-1 like RNA-binding protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
RNP-1 like RNA-binding protein
scnpilot_p_inoc_scaffold_555_39
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45037..48294
DNA (3258bp) protein (1086aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376971 rbh
Variovorax paradoxus strain MEDvA23 contig_135, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16300.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamon
hypothetical protein
scnpilot_p_inoc_scaffold_555_40
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48291..49211
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376970 rbh
Variovorax paradoxus strain MEDvA23 contig_135, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16299.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamon
scnpilot_p_inoc_scaffold_555_41
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49184..49891
DNA (708bp) protein (236aa)
glycosyl transferase n=1 Tax=Acidovorax radicis RepID=UPI000237696F rbh
family 2 glycosyl transferase
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
scnpilot_p_inoc_scaffold_555_42
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50130..50855
DNA (726bp) protein (242aa)
chemotaxis protein CheY n=1 Tax=Acidovorax radicis RepID=UPI000237696D rbh
two component transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
two component transcriptional regulator
scnpilot_p_inoc_scaffold_555_43
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50852..52243
DNA (1392bp) protein (464aa)
histidine kinase n=1 Tax=Acidovorax radicis RepID=UPI000237696C rbh
integral membrane sensor signal transduction histidine kinase Tax=GWA2_Burkholderiales_64_37_curated
integral membrane sensor signal transduction histidine kinase
scnpilot_p_inoc_scaffold_555_44
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52410..53504
DNA (1095bp) protein (365aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Acidovorax radicis RepID=UPI000237696B rbh
ABC transporter Tax=GWA2_Burkholderiales_64_37_curated
ABC transporter
scnpilot_p_inoc_scaffold_555_45
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53637..54659
DNA (1023bp) protein (341aa)
Auxin efflux carrier n=1 Tax=Acidovorax sp. NO-1 RepID=H0C3P4_9BURK rbh
auxin efflux carrier Tax=GWA2_Burkholderiales_64_37_curated
auxin efflux carrier
scnpilot_p_inoc_scaffold_555_46
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54730..55137)
DNA (408bp) protein (136aa)
glyoxalase n=1 Tax=Acidovorax radicis RepID=UPI0002376960
glyoxalase/bleomycin resistance protein/dioxygenase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
glyoxalase/bleomycin resistance protein/dioxygenase
scnpilot_p_inoc_scaffold_555_47
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55225..55560)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IAB8_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46081.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.
scnpilot_p_inoc_scaffold_555_48
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55694..56332)
DNA (639bp) protein (213aa)
pyridoxamine 5''''-phosphate oxidase n=1 Tax=Acidovorax radicis RepID=UPI000237695F rbh
pyridoxamine 5'-phosphate oxidase Tax=GWA2_Burkholderiales_64_37_curated
pyridoxamine 5'-phosphate oxidase
scnpilot_p_inoc_scaffold_555_49
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56482..57054
DNA (573bp) protein (191aa)
TetR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI000237695E rbh
TetR family transcriptional regulator Tax=GWA2_Burkholderiales_64_37_curated
TetR family transcriptional regulator
scnpilot_p_inoc_scaffold_555_50
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57236..57697
DNA (462bp) protein (154aa)
(2Fe-2S)-binding protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C3P2_9BURK rbh
isoquinoline 1-oxidoreductase subunit alpha Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
isoquinoline 1-oxidoreductase subunit alpha
scnpilot_p_inoc_scaffold_555_51
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57720..59990
DNA (2271bp) protein (757aa)
Isoquinoline 1-oxidoreductase subunit beta n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1E9_9BURK rbh
isoquinoline 1-oxidoreductase subunit beta Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
isoquinoline 1-oxidoreductase subunit beta
scnpilot_p_inoc_scaffold_555_52
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61163..62020)
DNA (858bp) protein (286aa)
UspA domain-containing protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTR6_9BURK rbh
UspA domain-containing protein {ECO:0000313|EMBL:EHL24332.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
UspA domain-containing protein
scnpilot_p_inoc_scaffold_555_53
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62032..62682)
DNA (651bp) protein (217aa)
Sulfate transporter n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTR7_9BURK
Sulfate transporter {ECO:0000313|EMBL:EHL24333.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
sulfate transporter
scnpilot_p_inoc_scaffold_555_54
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62679..63443)
DNA (765bp) protein (255aa)
Sulfate transporter n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTR7_9BURK
Sulfate transporter {ECO:0000313|EMBL:EHL24333.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
sulP; sulfate transporter
scnpilot_p_inoc_scaffold_555_55
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63784..64659)
DNA (876bp) protein (292aa)
methylthioadenosine phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] id=12550229 bin=BDI species=Caldimonas manganoxidans genus=Caldimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
methylthioadenosine phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
methylthioadenosine phosphorylase
scnpilot_p_inoc_scaffold_555_56
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64808..65263
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Y21_RHOFD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
hypothetical protein
scnpilot_p_inoc_scaffold_555_57
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65276..66418
DNA (1143bp) protein (381aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Y20_RHOFD rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ABD69333.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodofer
scnpilot_p_inoc_scaffold_555_58
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66415..67341
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2ZB89_PSEAC rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_555_59
CG_Rhodof_01, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67338..67571
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Y19_RHOFD
hypothetical protein
hypothetical protein Tax=CG_Rhodof_01
scnpilot_p_inoc_scaffold_555_60
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67561..68193
DNA (633bp) protein (211aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Y18_RHOFD
RNA polymerase sigma factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABD69335.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source
Displaying items 31-60 of 74 in total

View Taxonomy