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scnpilot_p_inoc_scaffold_555_60

Organism: SCNpilot_P_inoc_Acidovorax_64_34

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: 67561..68193

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Y18_RHOFD similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 207.0
  • Bit_score: 282
  • Evalue 3.50e-73
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 207.0
  • Bit_score: 282
  • Evalue 9.90e-74
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABD69335.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 207.0
  • Bit_score: 282
  • Evalue 4.90e-73

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Taxonomy

Rhodoferax ferrireducens → Rhodoferax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGACGTTTGACAAATTGAAGGCGGAGGGGGTGGACGCAGCTGTTGGAGCACCCTCGATCAGTGACCCTGAATTGCTGAAGTCCTTGCGCAGTCAGATGCTGAAATTTGCGCATTTGCAGCTGGGCGACGAACAGTCCGCCGAGGATGCCGTGCAGGAGGCATTGATCGGTGCGCTGAAGAACGCTGCGGCCTTTCGTGGCCATGCGGCGTTGAAAACCTGGGTGTTTGCGATTCTCAAGAACAAGATTGCCGATTCGCTGAGGCAAAAGAAGCGGCTTGGCGAAGCCAGCGCACTGATGCAGGAACGCGAGGAGCAGGAAGATCTCCACGAGCTTTTCAACGCCAAAGGATTCTGGGAGCCGGATGAACGGCCAGCAGCTTGGGGAAATCCGCAGGAAGCCTTGCACCAAAGCCAGTTCTGGAAGGTTTTCGAACTCTGCCTGGAGGCCCTGCCAGGGCAGCAGGCCCGCGTGTTCATGATGCGGGAATATATAGAGCTGGAGTCAGACGAAATCTGCGCTTCGGTCGGTATTTCGACATCAAACCTGAACGTCATCATGCATCGGGCTCGGCTTCGGCTTCGGGAGTGTTTGGAAAACAACTGGCATCAAACCAAGGGGCAACCATGCTGA
PROTEIN sequence
Length: 211
MTFDKLKAEGVDAAVGAPSISDPELLKSLRSQMLKFAHLQLGDEQSAEDAVQEALIGALKNAAAFRGHAALKTWVFAILKNKIADSLRQKKRLGEASALMQEREEQEDLHELFNAKGFWEPDERPAAWGNPQEALHQSQFWKVFELCLEALPGQQARVFMMREYIELESDEICASVGISTSNLNVIMHRARLRLRECLENNWHQTKGQPC*