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scnpilot_p_inoc_scaffold_145_1

Organism: SCNpilot_P_inoc_Acidovorax_64_34

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: comp(1..210)

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_0 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 70.0
  • Bit_score: 146
  • Evalue 1.80e-32
23S rRNA methyltransferase n=1 Tax=Aeromonas caviae RepID=UPI0002198303 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 70.0
  • Bit_score: 146
  • Evalue 1.30e-32
23S rRNA 5-methyluridine methyltransferase similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 70.0
  • Bit_score: 139
  • Evalue 2.70e-31

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Taxonomy

Aeromonas caviae → Aeromonas → Aeromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGGCCCAGTTTTTCAAGCCCCAAAAGAAGTCCACCCAGCCCCAACGTATTGAATTTACGGTAGACAGTCTGGATCACCACTGTGTCGGCGTCGGCCGTCATCAGGGCAAGGCCATCTTCGTCGAAGGGGCGCTGCCCGGCGAGGCCATCAAGGCCCGCATCATCGACGACAAGAAGCACTATGCCCACGCCGCCCTGCAACAGGTGGTG
PROTEIN sequence
Length: 70
MAQFFKPQKKSTQPQRIEFTVDSLDHHCVGVGRHQGKAIFVEGALPGEAIKARIIDDKKHYAHAALQQVV