ggKbase home page

scnpilot_p_inoc_scaffold_145

Search features with annotation key words

Displaying items 1-30 of 329 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_145_1
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..210)
DNA (210bp) protein (70aa)
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_0
23S rRNA methyltransferase n=1 Tax=Aeromonas caviae RepID=UPI0002198303
23S rRNA 5-methyluridine methyltransferase
scnpilot_p_inoc_scaffold_145_2
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

480..2018
DNA (1539bp) protein (513aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377F77 rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
histidine kinase
scnpilot_p_inoc_scaffold_145_3
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2071..2763)
DNA (693bp) protein (231aa)
Methyltransferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTK5_9BURK rbh
methyltransferase Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
methyltransferase
scnpilot_p_inoc_scaffold_145_4
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2760..4115)
DNA (1356bp) protein (452aa)
zinc protease n=1 Tax=Acidovorax radicis RepID=UPI0002377F75 rbh
peptidase M16 domain-containing protein Tax=GWA2_Burkholderiales_64_37_curated
peptidase M16 domain-containing protein
scnpilot_p_inoc_scaffold_145_5
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4137..5582)
DNA (1446bp) protein (482aa)
Peptidase M16 domain-containing protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTK3_9BURK rbh
peptidase M16 domain-containing protein Tax=GWA2_Burkholderiales_64_37_curated
peptidase M16 domain-containing protein
scnpilot_p_inoc_scaffold_145_6
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6021..6986
DNA (966bp) protein (322aa)
Signal recognition particle receptor FtsY n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTK2_9BURK rbh
signal recognition particle-docking protein FtsY Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
signal recognition particle-docking protein FtsY
scnpilot_p_inoc_scaffold_145_7
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7120..9789
DNA (2670bp) protein (890aa)
histidine kinase n=1 Tax=Acidovorax radicis RepID=UPI0002377F72 rbh
sensory box protein Tax=GWA2_Burkholderiales_64_37_curated
sensory box protein
scnpilot_p_inoc_scaffold_145_8
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9902..10966
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377F71 rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_145_9
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11037..11384)
DNA (348bp) protein (116aa)
cytochrome C biogenesis protein n=1 Tax=Acidovorax radicis RepID=UPI0002377F70
cuta1 divalent ion tolerance protein; K03926 periplasmic divalent cation tolerance protein Tax=GWA2_Burkholderiales_64_37_curated
CutA1 divalent ion tolerance protein
scnpilot_p_inoc_scaffold_145_10
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12097..13038
DNA (942bp) protein (314aa)
RNA polymerase sigma factor RpoH n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTJ9_9BURK rbh
RNA polymerase sigma-32 subunit RpoH Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
RNA polymerase sigma-32 subunit RpoH
scnpilot_p_inoc_scaffold_145_11
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13155..14189
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3C6_9BURK rbh
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
hypothetical protein
scnpilot_p_inoc_scaffold_145_12
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14441..15043
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000364D8E7
Uncharacterized protein {ECO:0000313|EMBL:GAD23665.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
cyclic nucleotide-binding protein
scnpilot_p_inoc_scaffold_145_13
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15062..16780)
DNA (1719bp) protein (573aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003821A31 rbh
PAS/PAC sensor-containing diguanylate cyclase {ECO:0000313|EMBL:GAO20835.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" sou
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
scnpilot_p_inoc_scaffold_145_14
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17170..17676)
DNA (507bp) protein (169aa)
Electron transport protein SCO1/SenC n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTJ7_9BURK rbh
electron transport protein SCO1/SenC; K07152 Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
electron transport protein SCO1/SenC
scnpilot_p_inoc_scaffold_145_15
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17796..18698)
DNA (903bp) protein (301aa)
protoheme IX farnesyltransferase (EC:2.5.1.-) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
protoheme IX farnesyltransferase (EC:2.5.1.-)
protoheme IX farnesyltransferase n=1 Tax=Acidovorax radicis RepID=UPI0002376271 rbh
scnpilot_p_inoc_scaffold_145_16
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18695..19876)
DNA (1182bp) protein (394aa)
cytochrome oxidase assembly protein n=1 Tax=Acidovorax radicis RepID=UPI0002376270 rbh
cytochrome oxidase assembly Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
cytochrome oxidase assembly
scnpilot_p_inoc_scaffold_145_17
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19876..20619)
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTJ4_9BURK rbh
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
hypothetical protein
scnpilot_p_inoc_scaffold_145_18
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20561..21346)
DNA (786bp) protein (262aa)
transmembrane cytochrome oxidase n=1 Tax=Acidovorax radicis RepID=UPI000237626E rbh
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
hypothetical protein
scnpilot_p_inoc_scaffold_145_19
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21362..21586
DNA (225bp) protein (75aa)
membrane protein n=1 Tax=Acidovorax radicis RepID=UPI000237626D
hypothetical protein Tax=GWA2_Burkholderiales_64_37_curated
hypothetical protein
scnpilot_p_inoc_scaffold_145_20
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21704..22585)
DNA (882bp) protein (294aa)
Cytochrome c oxidase subunit III n=1 Tax=Acidovorax sp. KKS102 RepID=K0I8K9_9BURK rbh
cytochrome c oxidase subunit III Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
cytochrome c oxidase subunit III
scnpilot_p_inoc_scaffold_145_21
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22651..22875)
DNA (225bp) protein (75aa)
membrane protein n=1 Tax=Acidovorax radicis RepID=UPI0002376619
hypothetical protein Tax=GWA2_Burkholderiales_64_37_curated
hypothetical protein
scnpilot_p_inoc_scaffold_145_22
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22872..23507)
DNA (636bp) protein (212aa)
cytochrome C oxidase assembly protein n=1 Tax=Acidovorax radicis RepID=UPI000237661A rbh
cytochrome C oxidase assembly protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
cytochrome C oxidase assembly protein
scnpilot_p_inoc_scaffold_145_23
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23521..23631)
DNA (111bp) protein (37aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTI8_9BURK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_145_24
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23643..25274)
DNA (1632bp) protein (544aa)
Cytochrome-c oxidase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTI7_9BURK rbh
cytochrome-c oxidase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
cytochrome-c oxidase
scnpilot_p_inoc_scaffold_145_25
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25305..26474)
DNA (1170bp) protein (390aa)
Cytochrome c oxidase subunit 2 n=1 Tax=Acidovorax sp. KKS102 RepID=K0I8L3_9BURK rbh
cytochrome c oxidase subunit II Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
cytochrome c oxidase subunit II
scnpilot_p_inoc_scaffold_145_26
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26534..27010)
DNA (477bp) protein (159aa)
Integral membrane protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EC11_9BURK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_145_27
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27162..27959)
DNA (798bp) protein (266aa)
biotin synthase n=1 Tax=Acidovorax radicis RepID=UPI000237697F rbh
biotin synthesis protein BioC Tax=GWA2_Burkholderiales_64_37_curated
biotin synthesis protein BioC
scnpilot_p_inoc_scaffold_145_28
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28091..28813
DNA (723bp) protein (241aa)
Phosphoribosyltransferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTI3_9BURK rbh
phosphoribosyltransferase Tax=GWA2_Burkholderiales_64_37_curated
phosphoribosyltransferase
scnpilot_p_inoc_scaffold_145_29
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28884..29426
DNA (543bp) protein (181aa)
tRNA methyltransferase n=1 Tax=Acidovorax radicis RepID=UPI0002376981 rbh
tRNA/rRNA methyltransferase SpoU Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
tRNA/rRNA methyltransferase SpoU
scnpilot_p_inoc_scaffold_145_30
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29476..30420)
DNA (945bp) protein (315aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002376982 rbh
LysR family transcriptional regulator Tax=GWA2_Burkholderiales_64_37_curated
LysR family transcriptional regulator
Displaying items 1-30 of 329 in total

View Taxonomy