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scnpilot_p_inoc_scaffold_2571

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2571_1
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..405
DNA (405bp) protein (135aa)
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Co
RpoD family RNA polymerase sigma factor id=12552317 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
RNA polymerase sigma-70 subunit RpoD
scnpilot_p_inoc_scaffold_2571_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(538..1755)
DNA (1218bp) protein (406aa)
formyl-CoA transferase (EC:2.8.3.16)
L-carnitine dehydratase/bile acid-inducible protein F id=12552318 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
L-carnitine dehydratase/bile acid-inducible protein F Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_2571_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1893..2198
DNA (306bp) protein (102aa)
transcriptional regulator id=12552319 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
transcriptional regulator
scnpilot_p_inoc_scaffold_2571_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2296..2655
DNA (360bp) protein (120aa)
peptidylprolyl isomerase (EC:5.2.1.8)
peptidyl-prolyl isomerase id=12552320 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
peptidyl-prolyl isomerase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_2571_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2666..4750)
DNA (2085bp) protein (695aa)
sodium:solute symporter n=1 Tax=Acidovorax radicis RepID=UPI0002377FAA
Na+/solute symporter Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Na+/solute symporter
scnpilot_p_inoc_scaffold_2571_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4743..5072)
DNA (330bp) protein (110aa)
hypothetical protein id=12552322 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_2571_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5110..7500)
DNA (2391bp) protein (797aa)
phosphoenolpyruvate synthase (EC:2.7.9.2) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
phosphoenolpyruvate synthase (EC:2.7.9.2) id=12552323 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
phosphoenolpyruvate synthase (EC:2.7.9.2)
scnpilot_p_inoc_scaffold_2571_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7697..8518
DNA (822bp) protein (274aa)
PEP synthetase regulatory protein id=12552324 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
PEP synthetase regulatory protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
PEP synthetase regulatory protein
scnpilot_p_inoc_scaffold_2571_9
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8900..9826)
DNA (927bp) protein (309aa)
Transcriptional regulator, LysR family-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y396_RAMTT
LysR family transcriptional regulator
Transcriptional regulator, LysR family-like protein {ECO:0000313|EMBL:AEG91183.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" s
scnpilot_p_inoc_scaffold_2571_10
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9892..10923)
DNA (1032bp) protein (344aa)
1-aminocyclopropane-1-carboxylate deaminase (EC:3.5.99.7)
1-aminocyclopropane-1-carboxylate deaminase {ECO:0000313|EMBL:ABM31298.1}; EC=3.5.99.7 {ECO:0000313|EMBL:ABM31298.1};; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
1-aminocyclopropane-1-carboxylate deaminase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TK10_ACIAC rbh
scnpilot_p_inoc_scaffold_2571_11
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11043..11810
DNA (768bp) protein (256aa)
Transcriptional regulator, AraC family n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TK09_ACIAC rbh
AraC family transcriptional regulator rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABM31297.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
Displaying 11 items

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