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scnpilot_p_inoc_scaffold_158_29

Organism: SCNpilot_P_inoc_Microbacterium_67_17

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 11 / 38
Location: 28419..29975

Top 3 Functional Annotations

Value Algorithm Source
two-component sensor id=7720210 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 516.0
  • Bit_score: 513
  • Evalue 2.30e-142
  • rbh
two-component system, histidine kinase similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 521.0
  • Bit_score: 435
  • Evalue 2.30e-119
Two-component system, histidine kinase {ECO:0000313|EMBL:CCE74075.1}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensi similarity UNIPROT
DB: UniProtKB
  • Identity: 49.1
  • Coverage: 521.0
  • Bit_score: 435
  • Evalue 1.10e-118

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1557
GTGAGCCAGCTGGAGCTGTCGGGGGTGTTGCGTCGCATCGTCGAATCGGCCGTCGAACTGGTCGGCGCGAAGTACGGCGCACTCGGCGTGATCGGCCCCGACGGGATGCTCGAGGAGTTCATCCATGTGGGGTTGACTGCCGAGACCGCTGAGGCGATCGGCCCCCCGCCGCGCGGCCGTGGCGTACTCGGAGCCCTCATTCACGATCCTCACGCGATCCGACTGGAGCACATCGGTCACGACCCCCGCTCGGTCGGCTTCCCGCGAAACCACCCGAGAATGGACAGCTTTGTCGGGGTGCCCATCCGCATCCGTGGGGAGGTGTTCGGAAACCTCTATCTCACCGAGCACCCCGACGGCGCGTTCACCGAAGAAGACACCGAACTGCTCGAGGCGCTCGCCGCCACCGCGGGTATCGCGATCGACAACGCGCGCCTGTACGAAGACTCGGTGCGTCGCGAACGGTGGGCCGCCGCTGCAGCCGAGATGAGCGCCGCCATGTTCTCGGACGAGACCGGCAGACCGCTGCAGCTTCTGGCAGACAAGGTCCTGCAACTCACGGATGCCGCAACCGTCGTGGTGATCTCGTCGATCAGCGACACCATGATGTGCGTCGAGGTCGCTCGCGGCGAGCACGCCGATGAACTCACCGGATCCGTTCATGCGCAAGCGGGCACCCTCTCGGGACGCGTCTTCGACAGCTGGCAGCCGCTGCAGGCCAGCGGTGACACCGTCGAGCTCGGCGACGAACTCGTGGCGTGGGGTCCGACGGTGGTCGTGCCGATGCTCGGCGCAGACGGCGTTCCCATGGTGCTCACCGTCGGGCGGCCCGTCGGCGCTCCCCGGTTCACAGACAAGGATGTCGACCTTGCCGCAGACCTCGCGGCCCAAGCCACGATCGCGCTCGAGCTCGCGCGCGGCAGGTCCGACCGGCAGGCGCTTGCCCTCATGGACGAGCGCGGCCGTATCGCCCGCGACCTGCACGATCACGTCATCCAGCGCTTGTTCGGCGCAGGGCTCTCGCTGCAGGCCGTCGCCGGCAGGGTCGGCGACGCGGCGGCGCGCACCGAGCTGCTCGAGCAGGTCGACGCCCTGGATGCCGCGATCACCGAGATCCGCACCGTCATCTTCGCCCTGCGCCAACCCCGCGCGTCATCCGGATCGGTCAGGCACCGCATTGTGGACGTCATCAGCGAAGTCGCGCCGTCGTTCTCGGAGTCTCCGCGGCTCGTCTTCCAGGGACCGCTGGATCTGCGCACACCGCCGGATGTCGCCGAGGATGTCGTCGCGGTCGTTCGCGAAGGGGTCAGCAACGTCGCCCGTCACGCTCAGGCGACGGAGACGTCGGTGCGCGTCGGGATCGCCGATGAGATGTTGGTCGTCGAAATCCTCGATGACGGCGTCGGCGTGCCGGAATCGCCGACACGCCGCAGCGGGGTCGGTAACCTTGAGGATCGCGCCGCGCGCTGGAACGGAGAGTTCGCTCTCACCGGACGCGATGGCGGCGGCACCCGCCTGCGGTGGGCGGTGCCTTTGGCCCAGGGAGAGACCACATGA
PROTEIN sequence
Length: 519
VSQLELSGVLRRIVESAVELVGAKYGALGVIGPDGMLEEFIHVGLTAETAEAIGPPPRGRGVLGALIHDPHAIRLEHIGHDPRSVGFPRNHPRMDSFVGVPIRIRGEVFGNLYLTEHPDGAFTEEDTELLEALAATAGIAIDNARLYEDSVRRERWAAAAAEMSAAMFSDETGRPLQLLADKVLQLTDAATVVVISSISDTMMCVEVARGEHADELTGSVHAQAGTLSGRVFDSWQPLQASGDTVELGDELVAWGPTVVVPMLGADGVPMVLTVGRPVGAPRFTDKDVDLAADLAAQATIALELARGRSDRQALALMDERGRIARDLHDHVIQRLFGAGLSLQAVAGRVGDAAARTELLEQVDALDAAITEIRTVIFALRQPRASSGSVRHRIVDVISEVAPSFSESPRLVFQGPLDLRTPPDVAEDVVAVVREGVSNVARHAQATETSVRVGIADEMLVVEILDDGVGVPESPTRRSGVGNLEDRAARWNGEFALTGRDGGGTRLRWAVPLAQGETT*