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scnpilot_p_inoc_scaffold_158_30

Organism: SCNpilot_P_inoc_Microbacterium_67_17

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 11 / 38
Location: 29972..30601

Top 3 Functional Annotations

Value Algorithm Source
LuxR response regulator receiver id=7720209 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 205.0
  • Bit_score: 287
  • Evalue 1.10e-74
two-component system response regulator similarity KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 213.0
  • Bit_score: 252
  • Evalue 8.40e-65
Putative two-component system response regulator {ECO:0000313|EMBL:BAC72087.1}; TaxID=227882 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyce similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 213.0
  • Bit_score: 252
  • Evalue 4.20e-64

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Taxonomy

Streptomyces avermitilis → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGATCCGTGTCTTCGTGCTCGATGACCACGAAATCGTCCGTCGAGGGGTCGTTGACCTCATCGACGCCGAGCGCGACATGGAAGTGATCGGCGAGGCATCCACCGCCCGCCAGGCTCTCGGGCGCATCGCGGCCACCATGCCCGATGTCGCAGTCCTCGACATGCGGCTTCCCGATGGCAGCGGTATCGACGTGTGCCGCGAGATCCGCTCCCAGCATCCGAGCGTCACGTGCCTCATCCTTACCGCCTACGACGATGACGAAGCCGCCTACTCGGCGGTGCTGGCCGGCGCTGCCGGCTACGTCCTGAAAGACATCAAGGCCAACGGTCTTCTTGACGGCATCCGTGCTGTCGCCGCGGGCAAGAACCTGCTCTCATCGGCTGCCGCCACGCGCGTGCGTGAACAGGCACGCGAGACCCGGTCGAGCACACCCGGCGTCGACCTGACCGACCGCGAACGTCAGGTGCTCGAGCTGATCGCCGAGGGTCTCACCAACCGTCAGATCGGGGAGCGCCTCGACCTCATGGAAAAGACGGTCAAAAACTACGTGACCGGTCTACTGCGCAAGCTCGGCATGGAGCGGCGTACTCAGGCCGCCGTCTACGCCACCTCGCTGCGGACCCAGTAA
PROTEIN sequence
Length: 210
MIRVFVLDDHEIVRRGVVDLIDAERDMEVIGEASTARQALGRIAATMPDVAVLDMRLPDGSGIDVCREIRSQHPSVTCLILTAYDDDEAAYSAVLAGAAGYVLKDIKANGLLDGIRAVAAGKNLLSSAAATRVREQARETRSSTPGVDLTDRERQVLELIAEGLTNRQIGERLDLMEKTVKNYVTGLLRKLGMERRTQAAVYATSLRTQ*