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scnpilot_p_inoc_scaffold_158

Search features with annotation key words

Displaying items 1-30 of 191 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_158_1
unknown

Not on your lists

3..77
DNA (75bp) protein (25aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_158_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(61..321)
DNA (261bp) protein (87aa)
Putative polyamine ABC transporter permease protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AII7_9ACTN
Spermidine/putrescine transport system permease protein PotB {ECO:0000313|EMBL:KJL35630.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="
scnpilot_p_inoc_scaffold_158_3
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(324..1469)
DNA (1146bp) protein (382aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbact
spermidine/putrescine ABC transporter ATPase; K11072 spermidine/putrescine transport system ATP-binding protein [EC:3.6.3.31] id=7719314 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
spermidine/putrescine ABC transporter ATPase
scnpilot_p_inoc_scaffold_158_4
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1476..2717)
DNA (1242bp) protein (414aa)
polyamine ABC transporter substrate-binding lipoprotein n=1 Tax=Glaciibacter superstes RepID=UPI0003B6D848
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:KJL35628.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacter
Spermidine/putrescine-binding periplasmic protein
scnpilot_p_inoc_scaffold_158_5
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2922..4310)
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI00028A09B9
Contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIP94023.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. M
hypothetical protein
scnpilot_p_inoc_scaffold_158_6
Mycobacterium sp. KMS, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4369..4842)
DNA (474bp) protein (158aa)
Transcriptional regulator, AsnC family n=3 Tax=Mycobacterium RepID=A1UC90_MYCSK
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ABL90448.1}; TaxID=189918 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (s
scnpilot_p_inoc_scaffold_158_7

Not on your lists

4921..5571
DNA (651bp) protein (217aa)
Bacterial regulatory protein, tetR family n=1 Tax=uncultured organism RepID=T1W5N9_9ZZZZ
Bacterial regulatory protein, tetR family {ECO:0000313|EMBL:AGU10312.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
putative TetR-family transcriptional regulator
scnpilot_p_inoc_scaffold_158_8
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5573..6631)
DNA (1059bp) protein (353aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:CDK01784.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CDK01784.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae
short-chain dehydrogenase n=1 Tax=Agromyces subbeticus RepID=UPI0003B6F0F0
putative short-chain dehydrogenase
scnpilot_p_inoc_scaffold_158_9
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6819..7847
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036179AD rbh
Periplasmic binding protein {ECO:0000313|EMBL:CDJ98861.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Fe3+-hydroxamate ABC transporter periplasmic protein
scnpilot_p_inoc_scaffold_158_10
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7844..8890
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003783598 rbh
Iron ABC transporter permease {ECO:0000313|EMBL:KDA04704.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
fhuB; iron(3+)-hydroxamate import system permease protein FhuB
scnpilot_p_inoc_scaffold_158_11
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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8887..9957
DNA (1071bp) protein (357aa)
ABC transporter permease n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L334_9MICO rbh
putative FecCD-family membrane transport protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_p_inoc_scaffold_158_12
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9954..10853
DNA (900bp) protein (300aa)
Iron-dicitrate ABC transporter ATP-binding protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L528_9MICO rbh
Iron-dicitrate ABC transporter ATP-binding protein {ECO:0000313|EMBL:EQM85680.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbact
cbrD; achromobactin ABC transporter, ATP-binding protein CbrD
scnpilot_p_inoc_scaffold_158_13
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10840..11784
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F29B69 rbh
Siderophore-interacting protein {ECO:0000313|EMBL:KDA04701.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
siderophore-interacting protein
scnpilot_p_inoc_scaffold_158_14
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11842..12060
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K2K7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL27169.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_p_inoc_scaffold_158_15
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12057..12461
DNA (405bp) protein (135aa)
Ribonuclease VapC n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KC68_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL27168.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_p_inoc_scaffold_158_16
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12506..12991)
DNA (486bp) protein (162aa)
glutathione peroxidase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B64EA
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
glutathione peroxidase
scnpilot_p_inoc_scaffold_158_17
Jonesia denitrificans, Jonesia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13015..13440)
DNA (426bp) protein (142aa)
Transcriptional regulator, MarR family n=1 Tax=Jonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134) RepID=C7R3U8_JONDD
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACV08805.1}; TaxID=471856 species="Bacteria; Actinobacteria; Micrococcales; Jonesiaceae; Jonesia.;" source="Jonesia denitrificans (strain ATCC
scnpilot_p_inoc_scaffold_158_18
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

14099..18058
DNA (3960bp) protein (1320aa)
hypothetical protein
Putative uncharacterized protein id=4578308 bin=GWF2_Lentisphaerae_57_35 species=Syntrophobotulus glycolicus genus=Syntrophobotulus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein Tax=GWF2_Lentisphaerae_57_35_curated
scnpilot_p_inoc_scaffold_158_19
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18275..18892)
DNA (618bp) protein (206aa)
Bifunctional deaminase-reductase domain-containing protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FGC5_VERMA
Dihydrofolate reductase {ECO:0000313|EMBL:EXG82597.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
bifunctional deaminase-reductase domain-containing protein
scnpilot_p_inoc_scaffold_158_20
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19035..20006
DNA (972bp) protein (324aa)
Uncharacterized protein n=2 Tax=Cyanothece RepID=B1WTV5_CYAA5
hypothetical protein
Tax=BJP_IG2069_Syntrophobacterales_46_30
scnpilot_p_inoc_scaffold_158_21
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20285..20857
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003775D78 rbh
Contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIU02845.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium
hypothetical protein
scnpilot_p_inoc_scaffold_158_22
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20926..21189
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Leifsonia rubra CMS 76R RepID=S7W1M9_9MICO
CopG family transcriptional regulator {ECO:0000313|EMBL:KHK97793.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrov
hypothetical protein
scnpilot_p_inoc_scaffold_158_23
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21186..21425
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Leifsonia rubra CMS 76R RepID=S7W480_9MICO
Uncharacterized protein {ECO:0000313|EMBL:CDJ99799.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
putative toxin-antitoxin system, toxin component
scnpilot_p_inoc_scaffold_158_24
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21428..22114)
DNA (687bp) protein (229aa)
polyketide cyclase n=1 Tax=Curtobacterium RepID=UPI0003B37DF9
Uncharacterized protein {ECO:0000313|EMBL:KDP91046.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808
hypothetical protein
scnpilot_p_inoc_scaffold_158_25
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22260..24959
DNA (2700bp) protein (900aa)
Iron-containing alcohol dehydrogenase n=2 Tax=Microbacterium RepID=H8E2H6_9MICO
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniforma
iron-containing alcohol dehydrogenase rbh
scnpilot_p_inoc_scaffold_158_26
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25044..26513)
DNA (1470bp) protein (490aa)
hypothetical protein n=1 Tax=Brevibacterium linens RepID=UPI0000510017 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGH43228.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
hypothetical protein
scnpilot_p_inoc_scaffold_158_27
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26631..27302)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X7L0_NAKMY
Uncharacterized protein {ECO:0000313|EMBL:KHK98030.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
scnpilot_p_inoc_scaffold_158_28
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27341..28249)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B5E6FE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE74076.1}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebras
scnpilot_p_inoc_scaffold_158_29
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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28419..29975
DNA (1557bp) protein (519aa)
two-component sensor id=7720210 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
two-component system, histidine kinase
Two-component system, histidine kinase {ECO:0000313|EMBL:CCE74075.1}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensi
scnpilot_p_inoc_scaffold_158_30
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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29972..30601
DNA (630bp) protein (210aa)
LuxR response regulator receiver id=7720209 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
two-component system response regulator
Putative two-component system response regulator {ECO:0000313|EMBL:BAC72087.1}; TaxID=227882 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyce
Displaying items 1-30 of 191 in total

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