ggKbase home page

scnpilot_p_inoc_scaffold_114

Search features with annotation key words

Displaying items 31-60 of 202 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_114_31
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


32835..34169
DNA (1335bp) protein (445aa)
Protein translocase subunit SecY n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU91_CHIPD
secY; preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae
scnpilot_p_inoc_scaffold_114_32
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

34332..35102
DNA (771bp) protein (257aa)
phosphosulfolactate synthase; K08097 phosphosulfolactate synthase [EC:4.4.1.19] Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
phosphosulfolactate synthase n=1 Tax=Segetibacter koreensis RepID=UPI00037780A3
phosphosulfolactate synthase
scnpilot_p_inoc_scaffold_114_33
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35393..35851
DNA (459bp) protein (153aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobact
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Joostella marina DSM 19592 RepID=I3C5V8_9FLAO
D-tyrosyl-tRNA(Tyr) deacylase
scnpilot_p_inoc_scaffold_114_34
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35890..36441)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NQD6_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17741.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
scnpilot_p_inoc_scaffold_114_35
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36450..37730)
DNA (1281bp) protein (427aa)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PI63_CHIPD
prolipoprotein diacylglyceryl transferase
Prolipoprotein diacylglyceryl transferase {ECO:0000313|EMBL:ACU63625.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="
scnpilot_p_inoc_scaffold_114_36
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37752..38243)
DNA (492bp) protein (164aa)
UPF0234 protein Cpin_6212 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PI56_CHIPD
hypothetical protein
UPF0234 protein Cpin_6212 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga
scnpilot_p_inoc_scaffold_114_37
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

38356..40059
DNA (1704bp) protein (568aa)
Peptidase M23 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNY0_CHIPD
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:ACU58677.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinoph
scnpilot_p_inoc_scaffold_114_38
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40056..40412)
DNA (357bp) protein (119aa)
UPF0102 protein Sph21_0669 id=4507389 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein; K07460 putative endonuclease Tax=GWA2_Bacteroidetes_32_17_curated
hypothetical protein
scnpilot_p_inoc_scaffold_114_39
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

40443..41429
DNA (987bp) protein (329aa)
manA; bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8); K15916 glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
manA; bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8)
Bifunctional phosphoglucose/phosphomannose isomerase n=1 Tax=Saprospira grandis DSM 2844 RepID=J0NX35_9SPHI
scnpilot_p_inoc_scaffold_114_40
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

41477..42676
DNA (1200bp) protein (400aa)
Alanine dehydrogenase {ECO:0000313|EMBL:ACU58757.1}; EC=1.4.1.1 {ECO:0000313|EMBL:ACU58757.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; C
Alanine dehydrogenase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ68_CHIPD
alanine dehydrogenase
scnpilot_p_inoc_scaffold_114_41
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

42797..44035
DNA (1239bp) protein (413aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxI
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9T7_NIAKG
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase
scnpilot_p_inoc_scaffold_114_42
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

44271..45752
DNA (1482bp) protein (494aa)
malate:quinone oxidoreductase (EC:1.1.5.4) rbh
Probable malate:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00212}; EC=1.1.5.4 {ECO:0000256|HAMAP-Rule:MF_00212};; MQO {ECO:0000256|HAMAP-Rule:MF_00212}; Malate dehydrogenase [quinone] {ECO:0000
Probable malate:quinone oxidoreductase n=1 Tax=Niabella soli DSM 19437 RepID=H1NKF4_9SPHI rbh
scnpilot_p_inoc_scaffold_114_43
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(46156..47787)
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Riemerella anatipestifer RA-CH-1 RepID=J9R0H3_RIEAN
Uncharacterized protein {ECO:0000313|EMBL:KGD66779.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aqu
hypothetical protein
scnpilot_p_inoc_scaffold_114_44
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


47974..49767
DNA (1794bp) protein (598aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1349421 species="Bacteria; Bac
Arginine--tRNA ligase n=1 Tax=Niabella soli DSM 19437 RepID=H1NJI0_9SPHI
arginyl-tRNA synthetase
scnpilot_p_inoc_scaffold_114_45
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

49950..51149
DNA (1200bp) protein (400aa)
Exonuclease SbcCD, D subunit n=2 Tax=Myroides odoratimimus RepID=H1GQK6_9FLAO rbh
sbcD; Exodeoxyribonuclease I subunit D
Exonuclease SbcCD, D subunit {ECO:0000313|EMBL:EHO06021.1}; TaxID=883150 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratimimu
scnpilot_p_inoc_scaffold_114_46
Myroides profundi, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

51163..54192
DNA (3030bp) protein (1010aa)
Exonuclease SbcC n=1 Tax=Myroides odoratimimus CCUG 10230 RepID=H1GQK5_9FLAO
exonuclease SbcC
Exonuclease SbcC {ECO:0000313|EMBL:AJH16042.1}; TaxID=480520 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides profundi.;"
scnpilot_p_inoc_scaffold_114_47
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

54224..55057
DNA (834bp) protein (278aa)
Putative holliday junction resolvase Hjc n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VR85_9SPHI rbh
Putative holliday junction resolvase Hjc {ECO:0000313|EMBL:EFK56286.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" so
restriction endonuclease
scnpilot_p_inoc_scaffold_114_48
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

55726..58374
DNA (2649bp) protein (883aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GHY1_9BACT
uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:BAP33469.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
scnpilot_p_inoc_scaffold_114_49
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

58388..59485
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000371E31D
Uncharacterized protein {ECO:0000313|EMBL:KHJ38828.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter gluco
hypothetical protein
scnpilot_p_inoc_scaffold_114_50
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(59556..64070)
DNA (4515bp) protein (1505aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZI5_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91797.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
scnpilot_p_inoc_scaffold_114_51
unknown

Not on your lists

comp(64067..64450)
DNA (384bp) protein (128aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_114_52
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(64849..69246)
DNA (4398bp) protein (1466aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W068_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91802.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
scnpilot_p_inoc_scaffold_114_53
unknown

Not on your lists

comp(69471..69641)
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_114_54
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(69752..71407)
DNA (1656bp) protein (552aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Chryseobacterium sp. CF314 RepID=J2KE53_9FLAO
AraC-type helix-turn-helix domain-containing protein {ECO:0000313|EMBL:CDN73881.1}; TaxID=1117645 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia
ycf3_1; Photosystem I assembly protein Ycf3
scnpilot_p_inoc_scaffold_114_55
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(72241..73005)
DNA (765bp) protein (255aa)
hypothetical protein Tax=CG_Bacteroid_02
scnpilot_p_inoc_scaffold_114_56
unknown

Not on your lists

73073..73552
DNA (480bp) protein (160aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_114_57
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(73905..74348)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9DTY7_9BACE
hypothetical protein Tax=GWA2_Bacteroidetes_30_7_curated
hypothetical protein
scnpilot_p_inoc_scaffold_114_58
unknown

Not on your lists

comp(74492..74635)
DNA (144bp) protein (48aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_114_59
unknown

Not on your lists

74679..74885
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_114_60
Bacteroides sp. CAG:714, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(75333..76070)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:714 RepID=R6YBM3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD33348.1}; TaxID=1262749 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bactero
shikimate dehydrogenase
Displaying items 31-60 of 202 in total

View Taxonomy