ggKbase home page

scnpilot_p_inoc_scaffold_114

Search features with annotation key words

Displaying items 181-202 of 202 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_114_181
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(205732..206895)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00037ADFFE
Uncharacterized protein {ECO:0000313|EMBL:KGO11298.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia mi
hypothetical protein
scnpilot_p_inoc_scaffold_114_182
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(206915..207133)
DNA (219bp) protein (73aa)
PRTRC system protein C n=1 Tax=Empedobacter brevis RepID=UPI00036E05AD
PRTRC system protein C {ECO:0000313|EMBL:KGO08733.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia mir
PRTRC system protein C
scnpilot_p_inoc_scaffold_114_183
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(207152..207769)
DNA (618bp) protein (206aa)
PRTRC system protein E n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0F6_9FLAO
PRTRC system protein E {ECO:0000313|EMBL:EFK33955.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium g
prtrc system protein e
scnpilot_p_inoc_scaffold_114_184
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(207788..208132)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2Z9_9FLAO
hypothetical protein
Molybdenum ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFF76126.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" s
scnpilot_p_inoc_scaffold_114_185
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(208150..208356)
DNA (207bp) protein (69aa)
nucleotide binding protein n=1 Tax=Empedobacter brevis RepID=UPI0003744396
DNA-binding protein {ECO:0000313|EMBL:KGO11294.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia mirico
hypothetical protein
scnpilot_p_inoc_scaffold_114_186
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(208410..208820)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W090_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CDT25484.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
hypothetical protein
scnpilot_p_inoc_scaffold_114_187
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(208873..209946)
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00036E24D1
Alpha/beta hydrolase {ECO:0000313|EMBL:KGO08739.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miric
phage/plasmid-like protein
scnpilot_p_inoc_scaffold_114_188
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(209990..210382)
DNA (393bp) protein (131aa)
Single-stranded DNA-binding protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W304_9FLAO
ssb4; single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070, ECO:0000256|RuleBase:RU000524}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae;
scnpilot_p_inoc_scaffold_114_189
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(210379..210492)
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VNJ0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK57487.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
scnpilot_p_inoc_scaffold_114_190
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(211042..212367)
DNA (1326bp) protein (442aa)
integrase n=1 Tax=Empedobacter brevis RepID=UPI00036A9533
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFK56917.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacter
integrase family protein
scnpilot_p_inoc_scaffold_114_191
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

212649..214628
DNA (1980bp) protein (660aa)
Pyruvate dehydrogenase (acetyl-transferring), 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring); K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] Tax=RIFOXYD2_FULL_
Dehydrogenase E1 component n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJW5_CHIPD
dehydrogenase E1 component
scnpilot_p_inoc_scaffold_114_192
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

214911..215357
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3C840_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL66179.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp.
hypothetical protein
scnpilot_p_inoc_scaffold_114_193
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

215956..217065
DNA (1110bp) protein (370aa)
DNA protecting protein DprA n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLJ6_NIAKG
DNA protecting protein DprA
DNA protecting protein DprA {ECO:0000313|EMBL:AEV96565.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreens
scnpilot_p_inoc_scaffold_114_194
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(217062..217661)
DNA (600bp) protein (200aa)
RNA polymerase sigma factor/ECF subfamily (Sigma-70) n=1 Tax=Pedobacter sp. BAL39 RepID=A6EIR2_9SPHI
RNA polymerase sigma factor/ECF subfamily (Sigma-70) {ECO:0000313|EMBL:EDM34607.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter
sigma-70 family RNA polymerase sigma factor
scnpilot_p_inoc_scaffold_114_195
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(217855..219027)
DNA (1173bp) protein (391aa)
endonuclease n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029AACFD
Uncharacterized protein {ECO:0000313|EMBL:GAF01584.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans
endonuclease/exonuclease/phosphatase
scnpilot_p_inoc_scaffold_114_196
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(219053..219925)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000377492C
Uncharacterized protein {ECO:0000313|EMBL:KIC95239.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
rhomboid family protein
scnpilot_p_inoc_scaffold_114_197
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(219929..221134)
DNA (1206bp) protein (402aa)
Aminotransferase class-III n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFU0_CHIPD
class III aminotransferase
Aminotransferase class-III {ECO:0000313|EMBL:ACU57923.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pi
scnpilot_p_inoc_scaffold_114_198
unknown

Not on your lists

221321..222364
DNA (1044bp) protein (348aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_114_199
unknown

Not on your lists

222441..222872
DNA (432bp) protein (144aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_114_200
unknown

Not on your lists

223256..223495
DNA (240bp) protein (80aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_114_201
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(223433..225397)
DNA (1965bp) protein (655aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; C
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5I758_9PORP
parvulin-like peptidyl-prolyl isomerase
scnpilot_p_inoc_scaffold_114_202
Weeksella virosa, Weeksella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

225739..226872
DNA (1134bp) protein (378aa)
4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27)
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:ADX66931.1}; EC=1.13.11.27 {ECO:0000313|EMBL:ADX66931.1};; TaxID=865938 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavob
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC 16016 / NCTC 11634 / CL345/78) RepID=F0NXM4_WEEVC
Displaying items 181-202 of 202 in total

View Taxonomy