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scnpilot_p_inoc_scaffold_114

Search features with annotation key words

Displaying items 1-30 of 202 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_114_1
GWF1_Flavobacteria_32_7, GWF1_Flavobacteria_32_7, GWF1_Flavobacteria_32_7, GWF1_Flavobacteria_32_7, Bacteroidetes, Bacteria

Not on your lists

comp(84..176)
DNA (93bp) protein (31aa)
Uncharacterized protein id=2720759 bin=GWF1_Flavobacteria_32_7 species=Ornithobacterium rhinotracheale genus=Ornithobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
Uncharacterized protein id=2720759 bin=GWF1_Flavobacteria_32_7 species=Ornithobacterium rhinotracheale genus=Ornithobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
hypothetical protein
scnpilot_p_inoc_scaffold_114_2
GWF1_Flavobacteria_32_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

263..1030
DNA (768bp) protein (256aa)
hypothetical protein Tax=GWF1_Flavobacteria_32_7_curated
hypothetical protein
scnpilot_p_inoc_scaffold_114_3
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1347..2987)
DNA (1641bp) protein (547aa)
peptidase, S8/S53 family (EC:3.4.21.-) Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S6I1_9FLAO rbh
S8 family peptidase
scnpilot_p_inoc_scaffold_114_4
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3060..3989)
DNA (930bp) protein (310aa)
Putative Glycosyl transferase, family 2 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NDY9_9EURY
Putative glycosyltransferase {ECO:0000313|EMBL:GAO43713.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumi
putative glycosyltransferase
scnpilot_p_inoc_scaffold_114_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4048..5607)
DNA (1560bp) protein (520aa)
Histidine ammonia-lyase {ECO:0000313|EMBL:ACU59349.1}; EC=4.3.1.3 {ECO:0000313|EMBL:ACU59349.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae;
Histidine ammonia-lyase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAX7_CHIPD
histidine ammonia-lyase
scnpilot_p_inoc_scaffold_114_6
unknown

Not on your lists

comp(6205..6366)
DNA (162bp) protein (54aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_114_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6580..7302
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000368F1BB
Biopolymer transporter ExbB {ECO:0000313|EMBL:KIC93294.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumib
MotA/TolQ/ExbB proton channel
scnpilot_p_inoc_scaffold_114_8
unknown

Not on your lists

comp(8077..9000)
DNA (924bp) protein (308aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_114_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9205..9495
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003700443
Ribosome-binding factor A; K02834 ribosome-binding factor A Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Ribosome-binding factor A
scnpilot_p_inoc_scaffold_114_10
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9642..10784
DNA (1143bp) protein (381aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC96117.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
ABC-type transport system, involved in lipoprotein release, permease component id=3770454 bin=GWF2_Bacteroidetes_33_38 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
lipoprotein release ABC transporter permease
scnpilot_p_inoc_scaffold_114_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10883..12052
DNA (1170bp) protein (390aa)
Proline dehydrogenase {ECO:0000313|EMBL:ACU63859.1}; EC=1.5.99.8 {ECO:0000313|EMBL:ACU63859.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae;
Proline dehydrogenase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PKU9_CHIPD
proline dehydrogenase
scnpilot_p_inoc_scaffold_114_12
unknown

Not on your lists

12083..12199
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_114_13
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12153..12794
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G3E5_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EEI90150.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
hypothetical protein
scnpilot_p_inoc_scaffold_114_14
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12829..15069
DNA (2241bp) protein (747aa)
PKD domain containing protein id=4096970 bin=GWF2_Bacteroidetes_35_48 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
PKD domain-containing protein Tax=GWF2_Bacteroidetes_35_48_curated
PKD domain-containing protein
scnpilot_p_inoc_scaffold_114_15
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15161..16870)
DNA (1710bp) protein (570aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
Lysine--tRNA ligase n=3 Tax=Myroides odoratimimus RepID=H1GP50_9FLAO
lysyl-tRNA synthetase, class II
scnpilot_p_inoc_scaffold_114_16
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17065..19074
DNA (2010bp) protein (670aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SD37_9FLAO
hypothetical protein Tax=GWF2_Bacteroidetes_38_335_curated
hypothetical protein
scnpilot_p_inoc_scaffold_114_17
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19415..20944)
DNA (1530bp) protein (510aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=929556 species="Bacteria; Ba
Glutamate--tRNA ligase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KM55_SOLCM
glutamyl-tRNA synthetase
scnpilot_p_inoc_scaffold_114_18
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21127..21777
DNA (651bp) protein (217aa)
Cell wall-associated hydrolase, invasion-associated protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KLQ3_SOLCM
glycoside hydrolase
Glycoside hydrolase {ECO:0000313|EMBL:AIM38513.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacteri
scnpilot_p_inoc_scaffold_114_19
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21956..23776)
DNA (1821bp) protein (607aa)
PKD id=3877939 bin=GWF2_Bacteroidetes_38_335 species=Methanoplanus limicola genus=Methanoplanus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein Tax=GWF2_Bacteroidetes_38_335_curated
hypothetical protein
scnpilot_p_inoc_scaffold_114_20
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23889..25784
DNA (1896bp) protein (632aa)
ABC transporter related n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMP7_CHIPD
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACU58591.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
scnpilot_p_inoc_scaffold_114_21
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25827..27359
DNA (1533bp) protein (511aa)
Polysaccharide biosynthesis protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NTV2_9SPHI rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF17659.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
scnpilot_p_inoc_scaffold_114_22
unknown

Not on your lists

27361..28083
DNA (723bp) protein (241aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_114_23
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28115..28510)
DNA (396bp) protein (132aa)
Thioesterase superfamily protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7P9Y2_CHIPD
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ACU59219.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinoph
scnpilot_p_inoc_scaffold_114_24
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28667..29335)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D795_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU80514.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG
hypothetical protein
scnpilot_p_inoc_scaffold_114_25
unknown

Not on your lists

comp(29424..30080)
DNA (657bp) protein (219aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_114_26
unknown

Not on your lists

comp(30169..30498)
DNA (330bp) protein (110aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_114_27
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


30826..31188
DNA (363bp) protein (121aa)
50S ribosomal protein L18 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU87_CHIPD
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga
scnpilot_p_inoc_scaffold_114_28
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


31291..31803
DNA (513bp) protein (171aa)
30S ribosomal protein S5 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TME0_NIAKG
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavi
30S ribosomal protein S5
scnpilot_p_inoc_scaffold_114_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


31875..32060
DNA (186bp) protein (62aa)
50S ribosomal protein L30 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU89_CHIPD
50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
50S ribosomal protein L30
scnpilot_p_inoc_scaffold_114_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


32172..32618
DNA (447bp) protein (149aa)
50S ribosomal protein L15 n=1 Tax=Segetibacter koreensis RepID=UPI00037717C3
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
50S ribosomal protein L15
Displaying items 1-30 of 202 in total

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