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scnpilot_p_inoc_scaffold_114_194

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: comp(217062..217661)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor/ECF subfamily (Sigma-70) n=1 Tax=Pedobacter sp. BAL39 RepID=A6EIR2_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 186.0
  • Bit_score: 227
  • Evalue 1.30e-56
RNA polymerase sigma factor/ECF subfamily (Sigma-70) {ECO:0000313|EMBL:EDM34607.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 186.0
  • Bit_score: 227
  • Evalue 1.80e-56
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 190.0
  • Bit_score: 220
  • Evalue 4.40e-55

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Taxonomy

Pedobacter sp. BAL39 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 600
ATGGAAGTTGCAATGTCAAAATCCTTTAAATCTTATTCAGACCAGGAGCTGATCCAGCATTTCGCTGCTTACGAGCAGTGGGTTATCAGGGAGCTGATCAGCCGGTACCAGTCAAAGATCTATACATCAATCTATATCATGGTAAAGGATAAATATCTTGCGGAAGATATTTACCAGGAAACTTTCATAAAGATTTTTACAACGCTCAGGAACGGCAAATATGCGGATCAGGGTAAATTCCTGCCCTGGGCCATGCGTATCGCCCATAACTTGTGCATCGATTATTTCAGGAAGGTAAAGCAGCAGGTAAAGGTAACCCTGCAGGACGGAACGGATATCCTGACCTTATTCCCTGCCTTGCAGGAAAATGCGGAACAGAAGACCATCAGGGAGCAATCCGATTATATCCTGCAGCGCCTGGTGGACGATCTGCCCCAGGAGCAGAAAGAGGTCATCCTGATGCGTATATACGGGGATATGTCCTTTAAGGAAATAGCGCGTGTGACCGGGGTGAGCATCAATACGGCGCTGGGCCGGATGCGCTACGGGCTGATGAATTTAAAGAAGACCATAGCAGTGCAGCAGATCAATATCCGCTAA
PROTEIN sequence
Length: 200
MEVAMSKSFKSYSDQELIQHFAAYEQWVIRELISRYQSKIYTSIYIMVKDKYLAEDIYQETFIKIFTTLRNGKYADQGKFLPWAMRIAHNLCIDYFRKVKQQVKVTLQDGTDILTLFPALQENAEQKTIREQSDYILQRLVDDLPQEQKEVILMRIYGDMSFKEIARVTGVSINTALGRMRYGLMNLKKTIAVQQINIR*