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scnpilot_p_inoc_scaffold_20_294

Organism: SCNpilot_P_inoc_Paludibacter_47_17

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 415863..416456

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Bacteroides faecis CAG:32 RepID=R6VAR0_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 195.0
  • Bit_score: 176
  • Evalue 2.60e-41
RNA polymerase ECF-type sigma factor Tax=CG_Paludi_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 194.0
  • Bit_score: 185
  • Evalue 7.70e-44
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 197.0
  • Bit_score: 171
  • Evalue 2.30e-40

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Taxonomy

CG_Paludi_01 → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 594
ATGAGTGTAACAGACGAAGCATTGATAGCTCAGCTCCGGCAGGGCGAGGAAAAGGCCTGGCGGCAGTTGTATGCGCAACATTACGAAGTGTTGTGCAGGGTAGCCTACGCCTTTCTGAACGACCGGCATTTATCGGAAGCGCTCGTGAATCAGCTCATTGCCGATAGTTGGGAAAAGCGGGAAACCTTATTGTTTGGCGGTACGCTGCGGTCGTACCTGGTACGGGCGGTACGCAACCGCTGCATTAATTACCTGCAGCTGGAGCAGGTTCGGAAAGAACGGCGGTTGTCGGAGTATGAATCGCTGGTGAGCGAAGCAGTAAGCGATGTCTATCCCACGGCAGAGCTGTTGGGCCGGGAGTTGGAAGCGCTCATCGGGCAATCGATCGGCAAACTGGCGCCCGAATGCCGGAGGGTTTTTGAGCTGAGTCGTTTCGGCGAATTATCGCATGCCGAAATTTCCGGCCATCTGAATATTTCTGTAAATACGGTTAAGTATCATATTAAGAATGCCTTATCGCGTTTGCGGGAGGACCTTTCCGATTATATTTCCTTGTTGATCCTGTTTTTTTTGTCGATCCGGCTACCCCTTTAG
PROTEIN sequence
Length: 198
MSVTDEALIAQLRQGEEKAWRQLYAQHYEVLCRVAYAFLNDRHLSEALVNQLIADSWEKRETLLFGGTLRSYLVRAVRNRCINYLQLEQVRKERRLSEYESLVSEAVSDVYPTAELLGRELEALIGQSIGKLAPECRRVFELSRFGELSHAEISGHLNISVNTVKYHIKNALSRLREDLSDYISLLILFFLSIRLPL*