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scnpilot_p_inoc_scaffold_20_295

Organism: SCNpilot_P_inoc_Paludibacter_47_17

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 416496..417509

Top 3 Functional Annotations

Value Algorithm Source
Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Bacteroides ovatus RepID=A7LYN3_BACOV similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 329.0
  • Bit_score: 312
  • Evalue 3.90e-82
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB56784.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldste similarity UNIPROT
DB: UniProtKB
  • Identity: 46.7
  • Coverage: 330.0
  • Bit_score: 320
  • Evalue 2.60e-84
Fe2+-dicitrate sensor, membrane component similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 329.0
  • Bit_score: 312
  • Evalue 1.40e-82

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Taxonomy

Parabacteroides goldsteinii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1014
ATGAACAACCCATCAGCTTCGGGCCGCCCCGACGATTTAATCAATGCATTTCTGAGCAAGGACTGTACAGGTGAAGAACAGCAGCGACTCCGCGACTGGCTGTCCGAATCGCCCGGCCATCTTCAATATTTCGAACAACAGCGCGAATTGTGGTTCTCGGCAGTGGTTTCCGACCGGTCGCTGAAGTTCGATCACGAAAAGGCTTTCGATTCGTTCCGGGAGTCGGTCATGCAGTTGCCGTCGGGTTCGAAACGCAGTTTCAGGCTTCATCCGGTGTGGAAGGTTGCGGCGTCGGTGGCTGTGTTGATGATAGCTTCGTTGCTGTTTTACCATATGGGCGTCAGAAGTATCAGCCGGCAAATGGCCGATGTGACGATAGAAGCTCCGCAGGGATCGCGTACCCGGCTGTTCCTCAACGATGGTTCGGTGGTATGGCTCAATGCAGGATCGCGATTGACCTATTCGCAGCAATTCGGGGTGAACGACCGCGATATCCGGCTCGAAGGGGAAGGGTATTTTGAAGTTCGTAAGAATGCCGAATTGCCGTTCAGGGTGGTAACACAGGAAATGACCGTGACGGTACTCGGTACGAAGTTCAATTTCTGTAATTTCCCCGACGACGACGAGGCCAGTGTTACCCTGCTGGAAGGAAAAGTGAGTTACCAGGTTGCTTCCGACACCAGGGAACAGTTGCTGGAGCCCGATCAGAAGGTGGTGCTGAATAAAAAATCGGGCATGGCTCAGGTCAGCGAGGTGCGGGCCAACCGTTCGGCCGAGTGGACGCAGGGTTATCTGTGTTTTGAAGACGATTTGCTAACCGATATTGTACGCCGGCTCGAACGGAGCTACAATGTCAATATTATCATAGTCGACGATACACTCGATACCTACCGTTTCTATGGCGATTTCCGTCGCACCGAACAAAGCATCGGCGATGTGCTCGAAATTCTTTCGTCGACCAATAAACTCACCTACCAGGTACAAGGAAAGCACATATACTTACACGCACGATAA
PROTEIN sequence
Length: 338
MNNPSASGRPDDLINAFLSKDCTGEEQQRLRDWLSESPGHLQYFEQQRELWFSAVVSDRSLKFDHEKAFDSFRESVMQLPSGSKRSFRLHPVWKVAASVAVLMIASLLFYHMGVRSISRQMADVTIEAPQGSRTRLFLNDGSVVWLNAGSRLTYSQQFGVNDRDIRLEGEGYFEVRKNAELPFRVVTQEMTVTVLGTKFNFCNFPDDDEASVTLLEGKVSYQVASDTREQLLEPDQKVVLNKKSGMAQVSEVRANRSAEWTQGYLCFEDDLLTDIVRRLERSYNVNIIIVDDTLDTYRFYGDFRRTEQSIGDVLEILSSTNKLTYQVQGKHIYLHAR*